RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 PPP1R2P1Q96PQ5 205 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 EML4Q9HC35 981 aaKnown RBP12.86□□□□□ -0.35
DNMT1-202ENST00000359526 RBM12Q9NTZ6 932 aaKnown RBP12.86□□□□□ -0.35
DNMT1-202ENST00000359526 GGA3Q9NZ52 723 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 PSMC3IPQ9P2W1 217 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-202ENST00000359526 ZMYM2Q9UBW7 1377 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 VEGFAP15692 232 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-202ENST00000359526 CYFIP1Q7L576 1253 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 CD302Q8IX05 232 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 SCFD2Q8WU76 684 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 GMCL1Q96IK5 515 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 GPR101Q96P66 508 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-202ENST00000359526 PCSK1NQ9UHG2 260 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 SPDYE2BA6NHP3 402 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 CYP26A1O43174 497 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
DNMT1-202ENST00000359526 FAM107AO95990 144 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 SPDYE6P0CI01 402 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 MARK3P27448 753 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 TYK2P29597 1187 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 FXR2P51116 673 aaKnown RBP eCLIP12.86□□□□□ -0.357e-7■■■□□ 18.6
DNMT1-202ENST00000359526 IRAK1P51617 712 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 HDAC4P56524 1084 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 CENPCQ03188 943 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 KLC1Q07866 573 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 SWSAP1Q6NVH7 229 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 WDR93Q6P2C0 686 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 TRAPPC11Q7Z392 1133 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 SEPT1Q8WYJ6 367 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 MS4A14Q96JA4 679 aa12.86□□□□□ -0.35
DNMT1-202ENST00000359526 FAM47DPA6NHR8 397 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 MAN1A2O60476 641 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 PRLRP16471 622 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 ATICP31939 592 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 TMEM259Q4ZIN3 620 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 ANGEL2Q5VTE6 544 aaKnown RBP12.85□□□□□ -0.35
DNMT1-202ENST00000359526 FRA10AC1Q70Z53 315 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 EEPD1Q7L9B9 569 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 RIN2Q8WYP3 895 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-202ENST00000359526 USP6NLQ92738 828 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 MTBPQ96DY7 904 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 SENP7Q9BQF6 1050 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 HSPBP1Q9NZL4 362 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 PPP1R3GB7ZBB8 358 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 PSMD3O43242 534 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.353e-8■■□□□ 12.6
DNMT1-202ENST00000359526 ELP3Q9H9T3 547 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 CTDNEP1O95476 244 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 AKR1B1P15121 316 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 EIF3EP60228 445 aaKnown RBP12.85□□□□□ -0.35
DNMT1-202ENST00000359526 STK4Q13043 487 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 PIGHQ14442 188 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-202ENST00000359526 REXO1L1PQ8IX06 675 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 WARS2Q9UGM6 360 aaKnown RBP12.85□□□□□ -0.35
DNMT1-202ENST00000359526 ZNF142P52746 1687 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-202ENST00000359526 RNF103-CHMP3A0A140T963 221 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 MYMKA6NI61 221 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 SNAP23O00161 211 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 CDH6P55285 790 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 SNX17Q15036 470 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 FAM102AQ5T9C2 384 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-202ENST00000359526 ZNF677Q86XU0 584 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 HOMEZQ8IX15 550 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 IFT43Q96FT9 208 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 RBM15Q96T37 977 aaKnown RBP eCLIP12.85□□□□□ -0.359e-8■■■■■ 27.3
DNMT1-202ENST00000359526 MAP2P11137 1827 aaKnown RBP12.85□□□□□ -0.35
DNMT1-202ENST00000359526 CCDC195A0A1B0GUA6 201 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 TMEM247A6NEH6 219 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 RAD51CO43502 376 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 IFNA8P32881 189 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 TRPM8Q7Z2W7 1104 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 RNF180Q86T96 592 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 JAMLQ86YT9 394 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 RHPN2Q8IUC4 686 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 NCLNQ969V3 563 aa12.85□□□□□ -0.35
DNMT1-202ENST00000359526 FAM163AQ96GL9 167 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-202ENST00000359526 MTO1Q9Y2Z2 717 aaKnown RBP12.85□□□□□ -0.35
DNMT1-202ENST00000359526 CCL15-CCL14A0A0B4J2E2 113 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 E2F6O75461 281 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 NMT1P30419 496 aaKnown RBP12.84□□□□□ -0.35
DNMT1-202ENST00000359526 YWHABP31946 246 aaKnown RBP12.84□□□□□ -0.35
DNMT1-202ENST00000359526 EPHX2P34913 555 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 CDK17Q00537 523 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 MTMR2Q13614 643 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 CCL15Q16663 113 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 C4orf22Q6V702 233 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 CCNYL1Q8N7R7 359 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 SLC26A7Q8TE54 656 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 ZIM3Q96PE6 472 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 ERP44Q9BS26 406 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 TSSK1BQ9BXA7 367 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 AAASQ9NRG9 546 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 ADA2Q9NZK5 511 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 POLRMTO00411 1230 aaKnown RBP12.84□□□□□ -0.35
DNMT1-202ENST00000359526 SLC4A1P02730 911 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 RARBP10826 455 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 PLA2G4AP47712 749 aa12.84□□□□□ -0.35
DNMT1-202ENST00000359526 ANKS1AQ92625 1134 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms