RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 LINC01465Q8N7H1 131 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 SLC35G2Q8TBE7 412 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 CGRRF1Q99675 332 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 PTPRHQ9HD43 1115 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 ARFGAP3Q9NP61 516 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 LUC7LQ9NQ29 371 aaKnown RBP13.55□□□□□ -0.24
GGPS1-202ENST00000358966 GJD2Q9UKL4 321 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 PCDHGC5Q9Y5F6 944 aa13.55□□□□□ -0.24
GGPS1-202ENST00000358966 OGTO15294 1046 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 HOXC6P09630 235 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 MCL1Q07820 350 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 TFDP1Q14186 410 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 ZNF484Q5JVG2 852 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 TMEM270Q6UE05 265 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 CEP112Q8N8E3 955 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 TPCN2Q8NHX9 752 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 OSMRQ99650 979 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 CPSF3Q9UKF6 684 aaKnown RBP13.54□□□□□ -0.24
GGPS1-202ENST00000358966 ANO9A1A5B4 782 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 GAS2O43903 313 aaKnown RBP13.54□□□□□ -0.24
GGPS1-202ENST00000358966 MYL3P08590 195 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 NFICP08651 508 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 SMIM10L2AP0DMW4 78 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 SMIM10L2BP0DMW5 78 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 ORC1Q13415 861 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 IQSEC1Q6DN90 963 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 TSHZ1Q6ZSZ6 1077 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 DAAM2Q86T65 1068 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 TRPV1Q8NER1 839 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 ZNF483Q8TF39 744 aaPredicted RBP13.54□□□□□ -0.24
GGPS1-202ENST00000358966 PAIP2Q9BPZ3 127 aaKnown RBP13.54□□□□□ -0.24
GGPS1-202ENST00000358966 GPBP1L1Q9HC44 474 aaPredicted RBP13.54□□□□□ -0.24
GGPS1-202ENST00000358966 KIAA1586Q9HCI6 787 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 HES2Q9Y543 173 aa13.54□□□□□ -0.24
GGPS1-202ENST00000358966 ANK1P16157 1881 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 TMEM110-MUSTN1A8MSY1 372 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 BUB1BO60566 1050 aaPredicted RBP13.53□□□□□ -0.24
GGPS1-202ENST00000358966 RFX1P22670 979 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 PROZP22891 400 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 LRRC57Q8N9N7 239 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 USP6NLQ92738 828 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 PDZD7Q9H5P4 517 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 MCM8Q9UJA3 840 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 TLL2Q9Y6L7 1015 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 PMM2O15305 246 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 TREHO43280 583 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 LDHAP00338 332 aaKnown RBP13.53□□□□□ -0.24
GGPS1-202ENST00000358966 KRT19P08727 400 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 WEE2P0C1S8 567 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 MYBL2P10244 700 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 GTF2H1P32780 548 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 PHKA2P46019 1235 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 RAP1GAPP47736 663 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 PDE6CP51160 858 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 WDR44Q5JSH3 913 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 GSPT2Q8IYD1 628 aaKnown RBP13.53□□□□□ -0.24
GGPS1-202ENST00000358966 RNF10Q8N5U6 811 aaKnown RBP13.53□□□□□ -0.24
GGPS1-202ENST00000358966 CPA5Q8WXQ8 436 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 CTNNBL1Q8WYA6 563 aaPredicted RBP13.53□□□□□ -0.24
GGPS1-202ENST00000358966 DDX1Q92499 740 aaKnown RBP13.53□□□□□ -0.24
GGPS1-202ENST00000358966 C2orf40Q9H1Z8 148 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 ZFYVE28Q9HCC9 887 aa13.53□□□□□ -0.24
GGPS1-202ENST00000358966 CPSF2Q9P2I0 782 aaKnown RBP13.53□□□□□ -0.24
GGPS1-202ENST00000358966 EME2A4GXA9 379 aaPredicted RBP13.52□□□□□ -0.24
GGPS1-202ENST00000358966 A6NJR5 290 aa13.52□□□□□ -0.24
GGPS1-202ENST00000358966 KCNK3O14649 394 aa13.52□□□□□ -0.24
GGPS1-202ENST00000358966 PGK1P00558 417 aa13.52□□□□□ -0.24
GGPS1-202ENST00000358966 DAB2IPQ5VWQ8 1189 aa13.52□□□□□ -0.24
GGPS1-202ENST00000358966 HDAC7Q8WUI4 952 aa13.52□□□□□ -0.24
GGPS1-202ENST00000358966 TMEM40Q8WWA1 233 aa13.52□□□□□ -0.24
GGPS1-202ENST00000358966 DNAJB3Q8WWF6 145 aa13.52□□□□□ -0.24
GGPS1-202ENST00000358966 AP1G2O75843 785 aa13.52□□□□□ -0.25
GGPS1-202ENST00000358966 F2P00734 622 aa13.52□□□□□ -0.25
GGPS1-202ENST00000358966 PSMC4P43686 418 aa13.52□□□□□ -0.25
GGPS1-202ENST00000358966 MCCD1P59942 119 aaPredicted RBP13.52□□□□□ -0.25
GGPS1-202ENST00000358966 CUL2Q13617 745 aa13.52□□□□□ -0.25
GGPS1-202ENST00000358966 LLGL1Q15334 1064 aa13.52□□□□□ -0.25
GGPS1-202ENST00000358966 MEI1Q5TIA1 1274 aa13.52□□□□□ -0.25
GGPS1-202ENST00000358966 CCDC26Q8TAB7 109 aa13.52□□□□□ -0.25
GGPS1-202ENST00000358966 TRIB2Q92519 343 aa13.52□□□□□ -0.25
GGPS1-202ENST00000358966 TRIM7Q9C029 511 aa13.52□□□□□ -0.25
GGPS1-202ENST00000358966 SLC5A4Q9NY91 659 aa13.52□□□□□ -0.25
GGPS1-202ENST00000358966 NXF1Q9UBU9 619 aaKnown RBP13.52□□□□□ -0.25
GGPS1-202ENST00000358966 POLIQ9UNA4 740 aa13.52□□□□□ -0.25
GGPS1-202ENST00000358966 PCDHB4Q9Y5E5 795 aa13.52□□□□□ -0.25
GGPS1-202ENST00000358966 TSPAN1O60635 241 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 C6orf222P0C671 652 aaPredicted RBP13.51□□□□□ -0.25
GGPS1-202ENST00000358966 STAG3L1P0CL83 205 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 ACO1P21399 889 aaKnown RBP13.51□□□□□ -0.25
GGPS1-202ENST00000358966 TMOD1P28289 359 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 VSNL1P62760 191 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 SLC7A5Q01650 507 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 GCNT1Q02742 428 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 RABGGTAQ92696 567 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 GDAP1L1Q96MZ0 367 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 LACTBL1A8MY62 500 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 CLTAP09496 248 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 TMEM191BP0C7N4 346 aa13.51□□□□□ -0.25
GGPS1-202ENST00000358966 HOXD8P13378 290 aaPredicted RBP13.51□□□□□ -0.25
GGPS1-202ENST00000358966 ABCD1P33897 745 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms