RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 AGGF1Q8N302 714 aaeCLIP14.45□□□□□ -0.1
VCP-201ENST00000358901 MAP2P11137 1827 aaKnown RBP14.45□□□□□ -0.1
VCP-201ENST00000358901 TECPR2O15040 1411 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 DIP2AQ14689 1571 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 RNF103-CHMP3A0A140T963 221 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 SPDYE2BA6NHP3 402 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 SPDYE6P0CI01 402 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 PIGHQ14442 188 aaPredicted RBP14.45□□□□□ -0.1
VCP-201ENST00000358901 COG2Q14746 738 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 ANO5Q75V66 913 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 TTC39CQ8N584 583 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 OR6P1Q8NGX9 317 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 ALKBH8Q96BT7 664 aaKnown RBP14.45□□□□□ -0.1
VCP-201ENST00000358901 FOXP3Q9BZS1 431 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 TRPV6Q9H1D0 765 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 WDR35Q9P2L0 1181 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 XPO7Q9UIA9 1087 aaKnown RBP14.45□□□□□ -0.1
VCP-201ENST00000358901 IGF2BP3O00425 579 aaKnown RBP eCLIP14.45□□□□□ -0.1
VCP-201ENST00000358901 GIT2Q14161 759 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 LRRC36Q1X8D7 754 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 KIAA1841Q6NSI8 718 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 CDC26Q8NHZ8 85 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 SPATA18Q8TC71 538 aa14.45□□□□□ -0.1
VCP-201ENST00000358901 EPS8L3Q8TE67 593 aaKnown RBP14.45□□□□□ -0.1
VCP-201ENST00000358901 PRKCEQ02156 737 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 LPAR1Q92633 364 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 PGBD4Q96DM1 585 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 DUSP9Q99956 384 aaKnown RBP14.44□□□□□ -0.1
VCP-201ENST00000358901 GCOM2Q9BZD3 368 aaPredicted RBP14.44□□□□□ -0.1
VCP-201ENST00000358901 SNX9Q9Y5X1 595 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 BNIP3LO60238 219 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 CAND2O75155 1236 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 ZNF200P98182 395 aaPredicted RBP14.44□□□□□ -0.1
VCP-201ENST00000358901 CUL3Q13618 768 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 HIC1Q14526 733 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 SGSM1Q2NKQ1 1148 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 FASTKD1Q53R41 847 aaKnown RBP14.44□□□□□ -0.1
VCP-201ENST00000358901 CBWD2Q8IUF1 395 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 CBWD1Q9BRT8 395 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 GPRC5CQ9NQ84 441 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 ZBBXA8MT70 800 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 LCP1P13796 627 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 ZFXP17010 805 aaPredicted RBP14.44□□□□□ -0.1
VCP-201ENST00000358901 FNTAP49354 379 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 LVRNQ6Q4G3 990 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 OTUD5Q96G74 571 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 ATP8B3O60423 1300 aa14.44□□□□□ -0.1
VCP-201ENST00000358901 LOC102724159A0A0B4J2E5 919 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 SGPL1O95470 568 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 BMP6P22004 513 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 STX3Q13277 289 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 PWP2Q15269 919 aaKnown RBP14.43□□□□□ -0.1
VCP-201ENST00000358901 GPAT2Q6NUI2 795 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 RASSF3Q86WH2 238 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 KCTD17Q8N5Z5 321 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 ARMC2Q8NEN0 867 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 ARHGEF26Q96DR7 871 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 PNMA3Q9UL41 463 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 XPAP23025 273 aaPredicted RBP14.43□□□□□ -0.1
VCP-201ENST00000358901 GTF2H1P32780 548 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 EMC2Q15006 297 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 CYB5D1Q6P9G0 228 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 ACSF2Q96CM8 615 aaPredicted RBP14.43□□□□□ -0.1
VCP-201ENST00000358901 TLR10Q9BXR5 811 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 CXorf56Q9H5V9 222 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.43□□□□□ -0.1
VCP-201ENST00000358901 RASSF10A6NK89 507 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 H3BRJ5 948 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 MOCS2O96007 188 aaPredicted RBP14.43□□□□□ -0.1
VCP-201ENST00000358901 ITGA4P13612 1032 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 PTK7Q13308 1070 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 TTC8Q8TAM2 541 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 FEZF2Q8TBJ5 459 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 GJD4Q96KN9 370 aaPredicted RBP14.43□□□□□ -0.1
VCP-201ENST00000358901 PPP1R36Q96LQ0 422 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 YY1AP1Q9H869 796 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 CACYBPQ9HB71 228 aaKnown RBP14.43□□□□□ -0.1
VCP-201ENST00000358901 TMBIM4Q9HC24 238 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 CD248Q9HCU0 757 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 CCDC78A2IDD5 438 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 RPS6P62753 249 aaKnown RBP14.43□□□□□ -0.1
VCP-201ENST00000358901 MEI1Q5TIA1 1274 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 ZNF772Q68DY9 489 aaPredicted RBP14.43□□□□□ -0.1
VCP-201ENST00000358901 COL23A1Q86Y22 540 aaPredicted RBP14.43□□□□□ -0.1
VCP-201ENST00000358901 TEX2Q8IWB9 1127 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 ICA1LQ8NDH6 482 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 ACTRT1Q8TDG2 376 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 FAM151AQ8WW52 585 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 RMDN2Q96LZ7 410 aa14.43□□□□□ -0.1
VCP-201ENST00000358901 HNRNPCL1O60812 293 aaKnown RBP14.42□□□□□ -0.1
VCP-201ENST00000358901 CCND1P24385 295 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 ACAD10Q6JQN1 1059 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 ATP8B4Q8TF62 1192 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 SEPT1Q8WYJ6 367 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 NRBF2Q96F24 287 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 THTPAQ9BU02 230 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 ABCF3Q9NUQ8 709 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 PCMTD2Q9NV79 361 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 ZNF446Q9NWS9 450 aa14.42□□□□□ -0.1
VCP-201ENST00000358901 ZNF70Q9UC06 446 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms