RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 AGO2Q9UKV8 859 aaKnown RBP9.14□□□□□ -0.95
RFX3-202ENST00000358730 USTQ9Y2C2 406 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 PCDHB4Q9Y5E5 795 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 PHIPQ8WWQ0 1821 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 DOCK1Q14185 1865 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 MAFGO15525 162 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 CFHP08603 1231 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 CREB1P16220 341 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 CD58P19256 250 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 GNA15P30679 374 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 TAS2R40P59535 323 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 CAV1Q03135 178 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 CUL2Q13617 745 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 RHOT1Q8IXI2 618 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 FUKQ8N0W3 1084 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 ANKRD42Q8N9B4 389 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 ATL2Q8NHH9 583 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 SGSM3Q96HU1 749 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 PWWP2AQ96N64 755 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 PDGFDQ9GZP0 370 aaPredicted RBP9.14□□□□□ -0.95
RFX3-202ENST00000358730 MLXIPLQ9NP71 852 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 PDLIM7Q9NR12 457 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 RBAKQ9NYW8 714 aaPredicted RBP9.14□□□□□ -0.95
RFX3-202ENST00000358730 ADAM22Q9P0K1 906 aa9.14□□□□□ -0.95
RFX3-202ENST00000358730 LRRIQ4A6NIV6 560 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 FOXO6A8MYZ6 492 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 VNN1O95497 513 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 C4BPAP04003 597 aaKnown RBP9.13□□□□□ -0.95
RFX3-202ENST00000358730 POTEJP0CG39 1038 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 FDX1P10109 184 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 DSG3P32926 999 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 NOMO3P69849 1222 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 CLDN10P78369 228 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 KLF1Q13351 362 aaPredicted RBP9.13□□□□□ -0.95
RFX3-202ENST00000358730 TRIM72Q6ZMU5 477 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 TMEM143Q96AN5 459 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 OSBPL8Q9BZF1 889 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 MRPL47Q9HD33 250 aaKnown RBP9.13□□□□□ -0.95
RFX3-202ENST00000358730 KCNK9Q9NPC2 374 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 KLHL11Q9NVR0 708 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 NINJ2Q9NZG7 142 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 SRCAPQ6ZRS2 3230 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 TCP11X1B4DZS4 312 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 DNAJC8O75937 253 aaPredicted RBP9.13□□□□□ -0.95
RFX3-202ENST00000358730 ACO1P21399 889 aaKnown RBP9.13□□□□□ -0.95
RFX3-202ENST00000358730 ABCD1P33897 745 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 PTP4A2Q12974 167 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 XRCC4Q13426 336 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 MAMLD1Q13495 774 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 SNCBQ16143 134 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 IZUMO3Q5VZ72 239 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 MIS18BP1Q6P0N0 1132 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 VSTM1Q6UX27 236 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 TRPM8Q7Z2W7 1104 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 PARP9Q8IXQ6 854 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 CCDC89Q8N998 374 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 RBBP8NLQ8NC74 664 aaPredicted RBP9.13□□□□□ -0.95
RFX3-202ENST00000358730 CDHR1Q96JP9 859 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 APOBEC3GQ9HC16 384 aaKnown RBP9.13□□□□□ -0.95
RFX3-202ENST00000358730 GINM1Q9NU53 330 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 FGFR1OP2Q9NVK5 253 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 TBK1Q9UHD2 729 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 RLFQ13129 1914 aa9.13□□□□□ -0.95
RFX3-202ENST00000358730 GSTTP1A0A1W2PQM5 241 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 CHUKO15111 745 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 GJB6O95452 261 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 BACE1P56817 501 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 NOP14P78316 857 aaKnown RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 PDE4CQ08493 712 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 CCNG2Q16589 344 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 GNPTABQ3T906 1256 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 XKR3Q5GH77 459 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 ZBTB41Q5SVQ8 909 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 ZFYVE27Q5T4F4 411 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 ABHD15Q6UXT9 468 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.12□□□□□ -0.95
RFX3-202ENST00000358730 GSTA5Q7RTV2 222 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 KATNAL2Q8IYT4 538 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 ABRAQ8N0Z2 381 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 DEPTORQ8TB45 409 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 ZBTB45Q96K62 511 aaPredicted RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 HAPLN2Q9GZV7 340 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 ABCF3Q9NUQ8 709 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.12□□□□□ -0.95
RFX3-202ENST00000358730 SLC12A4Q9UP95 1085 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 SCINQ9Y6U3 715 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 NFASCO94856 1347 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 TLR3O15455 904 aaKnown RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 SNX3O60493 162 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 CLTAP09496 248 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 SUPT20HL2P0C7V6 817 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 HARSP12081 509 aaKnown RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 BRAFP15056 766 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 KCNA3P22001 575 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 RDXP35241 583 aaKnown RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 ZKSCAN8Q15776 578 aaPredicted RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 SUPT20HL1Q3ZLR7 823 aa9.12□□□□□ -0.95
RFX3-202ENST00000358730 FAM133BQ5BKY9 247 aaKnown RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 CRELD2Q6UXH1 353 aaPredicted RBP9.12□□□□□ -0.95
RFX3-202ENST00000358730 PRUNE1Q86TP1 453 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms