RNA–Protein interactions for RNA: ENST00000358338.7

CACNA1E-202, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1E, Length 14,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-202ENST00000358338 ATP6V1E1P36543 226 aa7.02□□□□□ -1.29
CACNA1E-202ENST00000358338 ACTR2P61160 394 aa7.02□□□□□ -1.29
CACNA1E-202ENST00000358338 PDK2Q15119 407 aa7.02□□□□□ -1.29
CACNA1E-202ENST00000358338 POP5Q969H6 163 aaKnown RBP7.02□□□□□ -1.29
CACNA1E-202ENST00000358338 TEX13BQ9BXU2 312 aa7.02□□□□□ -1.29
CACNA1E-202ENST00000358338 DYTNA2CJ06 578 aa7.02□□□□□ -1.29
CACNA1E-202ENST00000358338 ENO4A6NNW6 628 aa7.02□□□□□ -1.29
CACNA1E-202ENST00000358338 CSTF3Q12996 717 aaKnown RBP7.02□□□□□ -1.29
CACNA1E-202ENST00000358338 CCNYL1Q8N7R7 359 aa7.02□□□□□ -1.29
CACNA1E-202ENST00000358338 ABCA6Q8N139 1617 aa7.02□□□□□ -1.29
CACNA1E-202ENST00000358338 KIF28PB7ZC32 967 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 EAPPQ56P03 285 aaPredicted RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 STRIP1Q5VSL9 837 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 TTC39BQ5VTQ0 682 aaPredicted RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 SCARA5Q6ZMJ2 495 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 XPO6Q96QU8 1125 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 PRDM16Q9HAZ2 1276 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 RP1P56715 2156 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 APRTP07741 180 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 PYGMP11217 842 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 FCER1AP12319 257 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 GEMIN4P57678 1058 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 EIF3EP60228 445 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 PAPD7Q5XG87 772 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 ZBTB33Q86T24 672 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 KCNF1Q9H3M0 494 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 CNOT7Q9UIV1 285 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 TMEM120BA0PK00 339 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 TPI1P60174 286 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 SF3B3Q15393 1217 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 SWT1Q5T5J6 900 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 EME1Q96AY2 570 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 NLRP4Q96MN2 994 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 MANSC1Q9H8J5 431 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 SLCO1B7G3V0H7 640 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 SNRPAP09012 282 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 YY1P25490 414 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 S100A5P33763 92 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 IL1RL1Q01638 556 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 SFSWAPQ12872 951 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 ZNF555Q8NEP9 628 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 SP110Q9HB58 689 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 DCDC2Q9UHG0 476 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 USP27XA6NNY8 438 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 RPS6KA5O75582 802 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 FDFT1P37268 417 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 CACNB1Q02641 598 aaPredicted RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 IMPG1Q17R60 797 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 RGS9BPQ6ZS82 235 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 FAM47EQ6ZV65 393 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 CRAMP1Q96RY5 1269 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 ITSN1Q15811 1721 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 ENTPD3O75355 529 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 LSM8O95777 96 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 NCAPHQ15003 741 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 SPATA18Q8TC71 538 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 RAPGEF5Q92565 580 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 USP13Q92995 863 aaPredicted RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 GARTP22102 1010 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 LVRNQ6Q4G3 990 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 YTHDF3Q7Z739 585 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 PPIL6Q8IXY8 311 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 COPG1Q9Y678 874 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 RPA1P27694 616 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 PRDX5P30044 214 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 CAPRIN1Q14444 709 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 CDO1Q16878 200 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 TUBGCP4Q9UGJ1 667 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 VHLP40337 213 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 PTGISQ16647 500 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 ATPAF2Q8N5M1 289 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 ZNF473Q8WTR7 871 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 MAGEB18Q96M61 343 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 SMARCAD1Q9H4L7 1026 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 COG4Q9H9E3 785 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 HNRNPH1P31943 449 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 PPARDQ03181 441 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 RAD51Q06609 339 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 ENGASEQ8NFI3 743 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 PHACTR1Q9C0D0 580 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 VPS11Q9H270 941 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 ANKEF1Q9NU02 776 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 APPL1Q9UKG1 709 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 SYF2O95926 243 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 FGFR4P22455 802 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 TMEM132DQ14C87 1099 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 SRBD1Q8N5C6 995 aaKnown RBP7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 FOPNLQ96NB1 174 aa7.01□□□□□ -1.29
CACNA1E-202ENST00000358338 EIF2AK2P19525 551 aaKnown RBP7□□□□□ -1.29
CACNA1E-202ENST00000358338 HOXD10P28358 340 aa7□□□□□ -1.29
CACNA1E-202ENST00000358338 SPRP35270 261 aaPredicted RBP7□□□□□ -1.29
CACNA1E-202ENST00000358338 NSUN4Q96CB9 384 aaKnown RBP7□□□□□ -1.29
CACNA1E-202ENST00000358338 CDV3Q9UKY7 258 aaKnown RBP7□□□□□ -1.29
CACNA1E-202ENST00000358338 H0Y3Z8 333 aa7□□□□□ -1.29
CACNA1E-202ENST00000358338 CYP26A1O43174 497 aa7□□□□□ -1.29
CACNA1E-202ENST00000358338 SLC12A1Q13621 1099 aa7□□□□□ -1.29
CACNA1E-202ENST00000358338 PTPRN2Q92932 1015 aa7□□□□□ -1.29
CACNA1E-202ENST00000358338 ULK4Q96C45 1275 aa7□□□□□ -1.29
CACNA1E-202ENST00000358338 ZNF335Q9H4Z2 1342 aaPredicted RBP7□□□□□ -1.29
CACNA1E-202ENST00000358338 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms