RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 RGS5O15539 181 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 FAM107AO95990 144 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 EIF2S1P05198 315 aaKnown RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 CHRM3P20309 590 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 MCCD1P59942 119 aaPredicted RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 CNTN1Q12860 1018 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 SNAP47Q5SQN1 464 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 EPM2AIP1Q7L775 607 aaPredicted RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 NLRP10Q86W26 655 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 GPT2Q8TD30 523 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 PRKAB1Q9Y478 270 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 DISP1Q96F81 1524 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 GCC2Q8IWJ2 1684 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 RGS7P49802 495 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 COX10Q12887 443 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 IZUMO1Q8IYV9 350 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 SSH3Q8TE77 659 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 EPC1Q9H2F5 836 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 SPEF1Q9Y4P9 236 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 ROBO2Q9HCK4 1378 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 TEX33O43247 280 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 ADCY6O43306 1168 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 KCNQ2O43526 872 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 ZNF24P17028 368 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 DYNC1I2Q13409 638 aaKnown RBP10.23□□□□□ -0.77
CHD3-202ENST00000358181 TBC1D9BQ66K14 1250 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 OSBP2Q969R2 916 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 KLHL1Q9NR64 748 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 NSMCE4AQ9NXX6 385 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 NOS3P29474 1203 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 RAB14P61106 215 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 FAM102AQ5T9C2 384 aaPredicted RBP10.23□□□□□ -0.77
CHD3-202ENST00000358181 ALS2CLQ60I27 953 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 ATL3Q6DD88 541 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 RUBCNQ92622 972 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 WDR11Q9BZH6 1224 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 TRIT1Q9H3H1 467 aaKnown RBP10.23□□□□□ -0.77
CHD3-202ENST00000358181 SLC24A3Q9HC58 644 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 TMCC3Q9ULS5 477 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 SPATA2Q9UM82 520 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 MYOM2P54296 1465 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 DGKIO75912 1065 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 CPSF4O95639 269 aaKnown RBP10.23□□□□□ -0.77
CHD3-202ENST00000358181 VCLP18206 1134 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 CASP1P29466 404 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 SKIV2L2P42285 1042 aaKnown RBP10.23□□□□□ -0.77
CHD3-202ENST00000358181 CLCN6P51797 869 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 RUNX1T1Q06455 604 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 SNX17Q15036 470 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 NEK10Q6ZWH5 1172 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 DPP10Q8N608 796 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 MYRIPQ8NFW9 859 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 FAM136AQ96C01 138 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 FAR2Q96K12 515 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 DNAJC12Q9UKB3 198 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 MAFFQ9ULX9 164 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 PRMT3O60678 531 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 OR6A2O95222 327 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 PLEKHA8P1O95397 391 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 CKBP12277 381 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 POU1F1P28069 291 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 PRIM2P49643 509 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 OTOAQ7RTW8 1153 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 DSG4Q86SJ6 1040 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 ATPAF2Q8N5M1 289 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 CSGALNACT1Q8TDX6 532 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 RMDN3Q96TC7 470 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 PDE11AQ9HCR9 933 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 GPN3Q9UHW5 284 aaPredicted RBP10.23□□□□□ -0.77
CHD3-202ENST00000358181 STON1Q9Y6Q2 735 aa10.23□□□□□ -0.77
CHD3-202ENST00000358181 LARGE1O95461 756 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 SDC4P31431 198 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 AVPR1AP37288 418 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 CDK17Q00537 523 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 SMU1Q2TAY7 513 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 MTSS1LQ765P7 747 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 STX12Q86Y82 276 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 MED8Q96G25 268 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 KCNS3Q9BQ31 491 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 HDHD2Q9H0R4 259 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 STAP1Q9ULZ2 295 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 RRN3P2A6NIE6 340 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 CYP21A2P08686 494 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 DSG3P32926 999 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 ALDH7A1P49419 539 aaKnown RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 MARSP56192 900 aaKnown RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 KRT76Q01546 638 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 KCNB1Q14721 858 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 PACS1Q6VY07 963 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 SLC44A5Q8NCS7 719 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 PLEKHF1Q96S99 279 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 ZMYND12Q9H0C1 365 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 POLR3FQ9H1D9 316 aaPredicted RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 PCDHA13Q9Y5I0 950 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 FAM25AB3EWG3 89 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 FAM25CB3EWG5 89 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 FAM25GB3EWG6 89 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 DYNC1LI2O43237 492 aaPredicted RBP10.22□□□□□ -0.77
CHD3-202ENST00000358181 FGRP09769 529 aa10.22□□□□□ -0.77
CHD3-202ENST00000358181 HARS2P49590 506 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms