RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 MAML1Q92585 1016 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 KIAA1586Q9HCI6 787 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 CCPG1Q9ULG6 757 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 SCINQ9Y6U3 715 aa18.81■□□□□ 0.6
RTN4-204ENST00000357732 WDR64B1ANS9 1081 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 TBC1D12O60347 775 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 GH1P01241 217 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 RRM1P23921 792 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 KLRC2P26717 231 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 NPTX2P47972 431 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 KRT76Q01546 638 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 ACCSLQ4AC99 568 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 CGB2Q6NT52 195 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 C15orf39Q6ZRI6 1047 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 MON1BQ7L1V2 547 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 SRRM1Q8IYB3 904 aaKnown RBP18.8■□□□□ 0.6
RTN4-204ENST00000357732 GPD1LQ8N335 351 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 GDAP1Q8TB36 358 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 OSBPL8Q9BZF1 889 aa18.8■□□□□ 0.6
RTN4-204ENST00000357732 RASA4BC9J798 803 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 H0YCG3 227 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 RASA4O43374 803 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 RALAP11233 206 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 RTP1P59025 263 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 CLDN10P78369 228 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 BRDTQ58F21 947 aaPredicted RBP18.79■□□□□ 0.6
RTN4-204ENST00000357732 FAM102BQ5T8I3 360 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 CYP4X1Q8N118 509 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 CNKSR1Q969H4 720 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 SAAL1Q96ER3 474 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 TMEM237Q96Q45 408 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 TCEAL9Q9UHQ7 104 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 USH1CQ9Y6N9 552 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 UMODL1Q5DID0 1318 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 DENND3A2RUS2 1198 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 E7ENQ6 273 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 LIN7AO14910 233 aaPredicted RBP18.79■□□□□ 0.6
RTN4-204ENST00000357732 ASMTLO95671 621 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 MAGEA4P43358 317 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 POLGP54098 1239 aaPredicted RBP18.79■□□□□ 0.6
RTN4-204ENST00000357732 TRABD2AQ86V40 505 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 CDAN1Q8IWY9 1227 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 AGGF1Q8N302 714 aaeCLIP18.79■□□□□ 0.6
RTN4-204ENST00000357732 INPP5DQ92835 1189 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 RMDN2Q96LZ7 410 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 GLIS2Q9BZE0 524 aaPredicted RBP18.79■□□□□ 0.6
RTN4-204ENST00000357732 LRMDAQ9H2I8 198 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 KMT5AQ9NQR1 393 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 KCNG1Q9UIX4 513 aa18.79■□□□□ 0.6
RTN4-204ENST00000357732 RPL26L1Q9UNX3 145 aaKnown RBP18.79■□□□□ 0.6
RTN4-204ENST00000357732 GSTTP1A0A1W2PQM5 241 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 DCTN3O75935 186 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 SPARCL1Q14515 664 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 XKR9Q5GH70 373 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 TMEM63BQ5T3F8 832 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 ECHDC2Q86YB7 292 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 RBM15Q96T37 977 aaKnown RBP eCLIP18.78■□□□□ 0.64e-8■■■■■ 30.1
RTN4-204ENST00000357732 HERPUD2Q9BSE4 406 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 R3HDM2Q9Y2K5 976 aaKnown RBP18.78■□□□□ 0.6
RTN4-204ENST00000357732 SPDYE2BA6NHP3 402 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 DKC1O60832 514 aaKnown RBP eCLIP18.78■□□□□ 0.6
RTN4-204ENST00000357732 SPDYE6P0CI01 402 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 ATP2A2P16615 1042 aaKnown RBP18.78■□□□□ 0.6
RTN4-204ENST00000357732 ALDH3A1P30838 453 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 ZKSCAN8Q15776 578 aaPredicted RBP18.78■□□□□ 0.6
RTN4-204ENST00000357732 POMGNT1Q8WZA1 660 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 AGBL1Q96MI9 1066 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 SH2D3AQ9BRG2 576 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 PHACTR1Q9C0D0 580 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 SSU72Q9NP77 194 aaKnown RBP18.78■□□□□ 0.6
RTN4-204ENST00000357732 GPRC5CQ9NQ84 441 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.78■□□□□ 0.68e-8■■■■■ 43.4
RTN4-204ENST00000357732 COL20A1Q9P218 1284 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 L3MBTL1Q9Y468 752 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 BRWD3Q6RI45 1802 aa18.78■□□□□ 0.6
RTN4-204ENST00000357732 LUC7L3O95232 432 aaKnown RBP18.77■□□□□ 0.6
RTN4-204ENST00000357732 FDX1P10109 184 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 CETPP11597 493 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 CAP2P40123 477 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 RASSF2P50749 326 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 MRPS9P82933 396 aaKnown RBP18.77■□□□□ 0.6
RTN4-204ENST00000357732 SF3A3Q12874 501 aaKnown RBP eCLIP18.77■□□□□ 0.6
RTN4-204ENST00000357732 SPP2Q13103 211 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 TRIP13Q15645 432 aaPredicted RBP18.77■□□□□ 0.6
RTN4-204ENST00000357732 WDR44Q5JSH3 913 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 PHF13Q86YI8 300 aaPredicted RBP18.77■□□□□ 0.6
RTN4-204ENST00000357732 IL31RAQ8NI17 732 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 DENND1AQ8TEH3 1009 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 CLEC4DQ8WXI8 215 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 RBM41Q96IZ5 413 aaKnown RBP18.77■□□□□ 0.6
RTN4-204ENST00000357732 FETUBQ9UGM5 382 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 PNMA3Q9UL41 463 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 EXOC1LA0A1B0GW35 172 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 RPSAP08865 295 aaKnown RBP18.77■□□□□ 0.6
RTN4-204ENST00000357732 MCL1Q07820 350 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 MGAT5Q09328 741 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 SMYD5Q6GMV2 418 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 PLEKHA7Q6IQ23 1121 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 CFAP61Q8NHU2 1237 aa18.77■□□□□ 0.6
RTN4-204ENST00000357732 ZNF70Q9UC06 446 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms