RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CLEC4MQ9H2X3 399 aaPredicted RBP13.46□□□□□ -0.26
SMC4-202ENST00000357388 ATP7AQ04656 1500 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 ACCSLQ4AC99 568 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 ARHGAP17Q68EM7 881 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 NUP93Q8N1F7 819 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 SH2D3CQ8N5H7 860 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.46□□□□□ -0.26
SMC4-202ENST00000357388 PIGOQ8TEQ8 1089 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 C1orf54Q8WWF1 131 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 FAM20AQ96MK3 541 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 OSBPL10Q9BXB5 764 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 ZNF302Q9NR11 478 aa13.46□□□□□ -0.26
SMC4-202ENST00000357388 TMEM120BA0PK00 339 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 TRIM49BA6NDI0 452 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 USP17L10C9JJH3 530 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 H7C0S8 307 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 RNF103O00237 685 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 STX7O15400 261 aaKnown RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 LARGE1O95461 756 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 FCER1AP12319 257 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 HOXA13P31271 388 aaPredicted RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 EIF3EP60228 445 aaKnown RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 CDC42EP1Q00587 391 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 MEI1Q5TIA1 1274 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 SNRNP48Q6IEG0 339 aaKnown RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 LVRNQ6Q4G3 990 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 PASD1Q8IV76 773 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 AGPAT1Q99943 283 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 TLR7Q9NYK1 1049 aaKnown RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 SLC26A4O43511 780 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 C21orf2O43822 256 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 RPS6KA4O75676 772 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 GRK2P25098 689 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 SPRP35270 261 aaPredicted RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 CRKP46108 304 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 BTKQ06187 659 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 NAA30Q147X3 362 aaPredicted RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 ZNF786Q8N393 782 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 VPS50Q96JG6 964 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 FAR2Q96K12 515 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 AIM2O14862 343 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 KIAA0391O15091 583 aaKnown RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 CYP2E1P05181 493 aaPredicted RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 CENPCQ03188 943 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 MDH1BQ5I0G3 518 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 SLC27A3Q5K4L6 730 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 CROCCP3Q8IVE0 287 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 RTL3Q8N8U3 475 aaKnown RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 MMP19Q99542 508 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 GGT7Q9UJ14 662 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 UBN2Q6ZU65 1347 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 SPDYE5A6NIY4 337 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 GHRP10912 638 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 ADRA2BP18089 450 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 TBL3Q12788 808 aaKnown RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 SPDYE7PQ495Y7 208 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 ARMC3Q5W041 872 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 MAGED4Q96JG8 741 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 ZFRQ96KR1 1074 aaKnown RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 PCDHA6Q9UN73 950 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 ARIH1Q9Y4X5 557 aaPredicted RBP13.45□□□□□ -0.26
SMC4-202ENST00000357388 PCDHA8Q9Y5H6 950 aa13.45□□□□□ -0.26
SMC4-202ENST00000357388 KIF28PB7ZC32 967 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 ZBTB5O15062 677 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 FKBP9O95302 570 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 ALDH1A1P00352 501 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 FCGR1AP12314 374 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 CPB1P15086 417 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 R3HDM1Q15032 1099 aaKnown RBP13.44□□□□□ -0.26
SMC4-202ENST00000357388 RCN1Q15293 331 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 SLC18A3Q16572 532 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 PKN3Q6P5Z2 889 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 FKBP9P1Q75LS8 142 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 E2F7Q96AV8 911 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 OTULINQ96BN8 352 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 ARHGEF26Q96DR7 871 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 CD248Q9HCU0 757 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 ATAD3AQ9NVI7 634 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 WDR35Q9P2L0 1181 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 FAM153AQ9UHL3 310 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 CLPTM1O96005 669 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 CDC25AP30304 524 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 CCDC149Q6ZUS6 474 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 CALML6Q8TD86 181 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 DIS3LQ8TF46 1054 aaKnown RBP13.44□□□□□ -0.26
SMC4-202ENST00000357388 USE1Q9NZ43 259 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 PTPRTO14522 1441 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 A0A1B0GTH6 734 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 ATP6V1B1P15313 513 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 CCZ1BP86790 482 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 CCZ1P86791 482 aaPredicted RBP13.44□□□□□ -0.26
SMC4-202ENST00000357388 PTK7Q13308 1070 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 LONRF1Q17RB8 773 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 DYNLL2Q96FJ2 89 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 SRPK1Q96SB4 655 aaKnown RBP13.44□□□□□ -0.26
SMC4-202ENST00000357388 LBHD1Q9BQE6 289 aaPredicted RBP13.44□□□□□ -0.26
SMC4-202ENST00000357388 KLHL4Q9C0H6 718 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 SARS2Q9NP81 518 aaKnown RBP13.44□□□□□ -0.26
SMC4-202ENST00000357388 RNF146Q9NTX7 359 aa13.44□□□□□ -0.26
SMC4-202ENST00000357388 ZSWIM5Q9P217 1185 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms