RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 R3HDM2Q9Y2K5 976 aaKnown RBP12.86□□□□□ -0.35
SMARCAL1-201ENST00000357276 GRIN3BO60391 1043 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 CCDC22O60826 627 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 DNAJC6O75061 913 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 TBX10O75333 385 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 MAGEA4P43358 317 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 EIF6P56537 245 aaKnown RBP12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 CYP4A11Q02928 519 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 PPP3CAQ08209 521 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 PTP4A2Q12974 167 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 RCN2Q14257 317 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 SYDE2Q5VT97 1194 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 FGD4Q96M96 766 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 PCDHA1Q9Y5I3 950 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZWINTO95229 277 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 PSMG1O95456 288 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 ADCY8P40145 1251 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 PSMC4P43686 418 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 CACNA2D1P54289 1103 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 CUL3Q13618 768 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 RCN1Q15293 331 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 TRIP13Q15645 432 aaPredicted RBP12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 TPTE2Q6XPS3 522 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 CEP128Q6ZU80 1094 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 KIAA0825Q8IV33 1275 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZNF75CPQ92670 426 aaPredicted RBP12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 DDX27Q96GQ7 796 aaKnown RBP12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 CCDC28BQ9BUN5 200 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 TMX4Q9H1E5 349 aaPredicted RBP12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 TUFT1Q9NNX1 390 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 KRT82Q9NSB4 513 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 PDP2Q9P2J9 529 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 EMSYQ7Z589 1322 aa12.85□□□□□ -0.35
SMARCAL1-201ENST00000357276 FAM196BA6NMK8 535 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZBED4O75132 1171 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 KRT36O76013 467 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 DYNC1I2Q13409 638 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 CCNG2Q16589 344 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 KCTD1Q719H9 257 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 MTDHQ86UE4 582 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 DDX1Q92499 740 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 KAT5Q92993 513 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 CFAP57Q96MR6 1250 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 KREMEN1Q96MU8 473 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 NR1H4Q96RI1 486 aaPredicted RBP12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 DMAP1Q9NPF5 467 aaPredicted RBP12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZNF212Q9UDV6 495 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 A0A1B0GVG6 124 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 LRRC37AA6NMS7 1700 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 SLITRK3O94933 977 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 IL1R1P14778 569 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 KCNQ4P56696 695 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 RASA3Q14644 834 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 PKN2Q16513 984 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 ARHGAP22Q7Z5H3 698 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 CCDC89Q8N998 374 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 SHC3Q92529 594 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 ZNF653Q96CK0 615 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 PAIP2Q9BPZ3 127 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 TUBB6Q9BUF5 446 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 NFASCO94856 1347 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 A0A1W2PRG0 241 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 CYP3A4P08684 503 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 IZUMO3Q5VZ72 239 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 FAM91A1Q658Y4 838 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 SLC47A2Q86VL8 602 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 KBTBD2Q8IY47 623 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 RBM41Q96IZ5 413 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 RBM15Q96T37 977 aaKnown RBP eCLIP12.84□□□□□ -0.352e-7■■■■□ 24.7
SMARCAL1-201ENST00000357276 SYNCQ9H7C4 482 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 PPCSQ9HAB8 311 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 KCND2Q9NZV8 630 aa12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 SRP68Q9UHB9 627 aaKnown RBP12.84□□□□□ -0.35
SMARCAL1-201ENST00000357276 EXOC1LA0A1B0GW35 172 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 KCNA3P22001 575 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 KPNB1Q14974 876 aaKnown RBP12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 C12orf56Q8IXR9 622 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 SLC5A5Q92911 643 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 SKA1Q96BD8 255 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 DTNBP1Q96EV8 351 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 TTC25Q96NG3 672 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 IGLV3-22A0A075B6J6 115 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 CAPN9O14815 690 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 SHMT1P34896 483 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 MAPK6Q16659 721 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 STXBP4Q6ZWJ1 553 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 SDCCAG8Q86SQ7 713 aaPredicted RBP12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 AMIGO3Q86WK7 504 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 SMC6Q96SB8 1091 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 ARL8BQ9NVJ2 186 aa12.83□□□□□ -0.36
SMARCAL1-201ENST00000357276 PIK3CDO00329 1044 aa12.82□□□□□ -0.36
SMARCAL1-201ENST00000357276 FDX1P10109 184 aa12.82□□□□□ -0.36
SMARCAL1-201ENST00000357276 CYP11B1P15538 503 aa12.82□□□□□ -0.36
SMARCAL1-201ENST00000357276 SSR1P43307 286 aaKnown RBP12.82□□□□□ -0.36
SMARCAL1-201ENST00000357276 KRT72Q14CN4 511 aa12.82□□□□□ -0.36
SMARCAL1-201ENST00000357276 WDR72Q3MJ13 1102 aa12.82□□□□□ -0.36
SMARCAL1-201ENST00000357276 PABPC1LQ4VXU2 614 aaKnown RBP12.82□□□□□ -0.36
SMARCAL1-201ENST00000357276 ACAD10Q6JQN1 1059 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms