RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 RNF103-CHMP3A0A140T963 221 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 JAMLQ86YT9 394 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 CHST13Q8NET6 341 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 PPHLN1Q8NEY8 458 aaKnown RBP12.35□□□□□ -0.43
COL9A1-202ENST00000357250 L2HGDHQ9H9P8 463 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 BATF3Q9NR55 127 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 IQCA1LA6NCM1 817 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 ZNF197O14709 1029 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 TXNP10599 105 aaKnown RBP12.35□□□□□ -0.43
COL9A1-202ENST00000357250 PDGFRAP16234 1089 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 TPI1P60174 286 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 HIC1Q14526 733 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 IER5Q5VY09 327 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 RAPGEF5Q92565 580 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 CCT8L2Q96SF2 557 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 MOV10L1Q9BXT6 1211 aaKnown RBP12.35□□□□□ -0.43
COL9A1-202ENST00000357250 OSBPL8Q9BZF1 889 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 JMJD4Q9H9V9 463 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 WDR70Q9NW82 654 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 FHOD1Q9Y613 1164 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 H0Y3Z8 333 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 EXTL3O43909 919 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 IL10P22301 178 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 POU5F1BQ06416 359 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 ZNF235Q14590 738 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 VEPH1Q14D04 833 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 SETD3Q86TU7 594 aaPredicted RBP12.35□□□□□ -0.43
COL9A1-202ENST00000357250 GFM2Q969S9 779 aaKnown RBP12.35□□□□□ -0.43
COL9A1-202ENST00000357250 XPO6Q96QU8 1125 aaKnown RBP12.35□□□□□ -0.43
COL9A1-202ENST00000357250 PLEKHA5Q9HAU0 1116 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 ANP32DO95626 131 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 CYP2C8P10632 490 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 ADORA2BP29275 332 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 TMEM132DQ14C87 1099 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 ZNF280CQ8ND82 737 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 ZNF473Q8WTR7 871 aaKnown RBP12.35□□□□□ -0.43
COL9A1-202ENST00000357250 GPRASP2Q96D09 838 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 CEP19Q96LK0 163 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 TMEM39BQ9GZU3 492 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 GPBP1L1Q9HC44 474 aaPredicted RBP12.35□□□□□ -0.43
COL9A1-202ENST00000357250 SLC38A7Q9NVC3 462 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.35□□□□□ -0.43
COL9A1-202ENST00000357250 INPP5FQ9Y2H2 1132 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 NEU2Q9Y3R4 380 aa12.35□□□□□ -0.43
COL9A1-202ENST00000357250 NPEPPSP55786 919 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 EMC2Q15006 297 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 LRRC43Q8N309 656 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 OR6P1Q8NGX9 317 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 PGBD4Q96DM1 585 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 CMTM5Q96DZ9 223 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 ZC3H11AO75152 810 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL9A1-202ENST00000357250 KLHL2O95198 593 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 HDAC4P56524 1084 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 BAATQ14032 418 aaPredicted RBP12.34□□□□□ -0.43
COL9A1-202ENST00000357250 E2F4Q16254 413 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 SRLQ86TD4 932 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 FBXL16Q8N461 479 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 CALML6Q8TD86 181 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 KCNK16Q96T55 309 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 DNAJC7Q99615 494 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 SLC13A1Q9BZW2 595 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 NIF3L1Q9GZT8 377 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 AGAP1Q9UPQ3 857 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 DCCP43146 1447 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 TNS2Q63HR2 1409 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 FGFR4P22455 802 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 RPS12P25398 132 aaKnown RBP12.34□□□□□ -0.43
COL9A1-202ENST00000357250 GUCY1A3Q02108 690 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 MYBPC2Q14324 1141 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 PTPAQ15257 358 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 FASTKD1Q53R41 847 aaKnown RBP12.34□□□□□ -0.43
COL9A1-202ENST00000357250 RGS9BPQ6ZS82 235 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 HIPK4Q8NE63 616 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 APPL2Q8NEU8 664 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 OR9Q1Q8NGQ5 310 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 IRX2Q9BZI1 471 aaPredicted RBP12.34□□□□□ -0.43
COL9A1-202ENST00000357250 VPS33BQ9H267 617 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 SMYD3Q9H7B4 428 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 ZC3H7BQ9UGR2 993 aaKnown RBP12.34□□□□□ -0.43
COL9A1-202ENST00000357250 MTO1Q9Y2Z2 717 aaKnown RBP12.34□□□□□ -0.43
COL9A1-202ENST00000357250 NPHP3-ACAD11A0A0J9YXS1 232 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 TCP11X1B4DZS4 312 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 GTF2H1P32780 548 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 HMGCS2P54868 508 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 ZNF200P98182 395 aaPredicted RBP12.34□□□□□ -0.43
COL9A1-202ENST00000357250 KRT33BQ14525 404 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 PDK1Q15118 436 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 WDR93Q6P2C0 686 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 C1orf228Q6PIY5 440 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 POTEAQ6S8J7 498 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 CDC26Q8NHZ8 85 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 TSSK1BQ9BXA7 367 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 ADA2Q9NZK5 511 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 HPSEQ9Y251 543 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 ALG6Q9Y672 507 aa12.34□□□□□ -0.43
COL9A1-202ENST00000357250 KCNN4O15554 427 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 GH1P01241 217 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 PGM1P36871 562 aa12.33□□□□□ -0.44
COL9A1-202ENST00000357250 NSUN2Q08J23 767 aaKnown RBP eCLIP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms