RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 DACT3Q96B18 629 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 OSGEPQ9NPF4 335 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 TOPORSQ9NS56 1045 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 A0A087X0B3 334 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 F8VZ95 297 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 CST8O60676 142 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 KLHL2O95198 593 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 HNRNPCP07910 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 CASP4P49662 377 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 SERPINB9P50453 376 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 NFIXQ14938 502 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 H3BRJ5 948 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 FAM153BP0C7A2 387 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 ACADSP16219 412 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 NCOA4Q13772 614 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 MEA1Q16626 185 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 FAM153CQ494X1 144 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 DUSP9Q99956 384 aaKnown RBP16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 POLR3CQ9BUI4 534 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 FAM153AQ9UHL3 310 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 HAO1Q9UJM8 370 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 A0A0A6YYK5 440 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 PDGFRAP16234 1089 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 SKOR1P84550 965 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 KCNMA1Q12791 1236 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 DAB2IPQ5VWQ8 1189 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 SUGP1Q8IWZ8 645 aaKnown RBP16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 TTC8Q8TAM2 541 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 DTNBP1Q96EV8 351 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 EHD4Q9H223 541 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 CDC42EP4Q9H3Q1 356 aaKnown RBP16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 CACYBPQ9HB71 228 aaKnown RBP16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 PRR12Q9ULL5 1215 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 SNX5Q9Y5X3 404 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 O00370 1275 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 KCNQ2O43526 872 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 ITGA4P13612 1032 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 ADRA2BP18089 450 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 CPA2P48052 419 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 INPP1P49441 399 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 SPP2Q13103 211 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 NLRP9Q7RTR0 991 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 ZC3H15Q8WU90 426 aaKnown RBP16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 DCPSQ96C86 337 aaKnown RBP16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 ATXN7L3BQ96GX2 97 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 FSD1LQ9BXM9 530 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 FAM49AQ9H0Q0 323 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 SEMA4AQ9H3S1 761 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 FBXO40Q9UH90 709 aa16.41■□□□□ 0.22
TRAPPC11-202ENST00000357207 ECE2O60344 883 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 E2F6O75461 281 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 HLA-DRAP01903 254 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 KRT4P19013 534 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 PPP4CP60510 307 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 ERVK-9P63128 1117 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 MAPRE2Q15555 327 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 Q3C1V9 767 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 FASTKD1Q53R41 847 aaKnown RBP16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 ATP8B4Q8TF62 1192 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 TEKT4Q8WW24 435 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 ZNF668Q96K58 619 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 INTS13Q9NVM9 706 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 MTHFD1LQ6UB35 978 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 ZNF677Q86XU0 584 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 ARID3BQ8IVW6 561 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 CNPY4Q8N129 248 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 ATG4AQ8WYN0 398 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 E2F7Q96AV8 911 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 RIT2Q99578 217 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 PCMTD2Q9NV79 361 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 FDX1P10109 184 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 GHRP10912 638 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 CIITAP33076 1130 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 EFNA5P52803 228 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 CIAPIN1Q6FI81 312 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 ACAD10Q6JQN1 1059 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 KIAA0895Q8NCT3 520 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 TBC1D16Q8TBP0 767 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 MAGEB18Q96M61 343 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 ZBTB18Q99592 522 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 AIPL1Q9NZN9 384 aa16.4■□□□□ 0.22
TRAPPC11-202ENST00000357207 RSPH10B2B2RC85 870 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 ADCY3O60266 1144 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 HUS1O60921 280 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 MED24O75448 989 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 RSPH10BP0C881 870 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 UBTFL6P0CB48 400 aaPredicted RBP16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 BMP6P22004 513 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 GEMIN4P57678 1058 aaKnown RBP16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 HABP4Q5JVS0 413 aaKnown RBP16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 ITPRIPL1Q6GPH6 555 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 DSTYKQ6XUX3 929 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 SP8Q8IXZ3 490 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 NDUFAF2Q8N183 169 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 TSEN2Q8NCE0 465 aaKnown RBP16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 FEZF2Q8TBJ5 459 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 SPATA18Q8TC71 538 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 SCFD1Q8WVM8 642 aa16.39■□□□□ 0.22
TRAPPC11-202ENST00000357207 CMTM5Q96DZ9 223 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms