RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 RAP1GDS1P52306 607 aa15.58■□□□□ 0.09
CHD4-201ENST00000357008 SEPT8Q92599 483 aa15.58■□□□□ 0.09
CHD4-201ENST00000357008 TNIP3Q96KP6 325 aa15.58■□□□□ 0.09
CHD4-201ENST00000357008 SIK2Q9H0K1 926 aa15.58■□□□□ 0.09
CHD4-201ENST00000357008 CARD9Q9H257 536 aa15.58■□□□□ 0.09
CHD4-201ENST00000357008 KDM4CQ9H3R0 1056 aa15.58■□□□□ 0.09
CHD4-201ENST00000357008 TSPAN17Q96FV3 270 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 MOV10L1Q9BXT6 1211 aaKnown RBP15.58■□□□□ 0.08
CHD4-201ENST00000357008 PDP2Q9P2J9 529 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 CHMP2BQ9UQN3 213 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 HSPA1AP0DMV8 641 aaKnown RBP15.58■□□□□ 0.08
CHD4-201ENST00000357008 HSPA1BP0DMV9 641 aaKnown RBP15.58■□□□□ 0.08
CHD4-201ENST00000357008 NLRP11P59045 1033 aaKnown RBP15.58■□□□□ 0.08
CHD4-201ENST00000357008 WDR72Q3MJ13 1102 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 SBK1Q52WX2 424 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 TAGAPQ8N103 731 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 GRID1Q9ULK0 1009 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 EP400NLQ6ZTU2 488 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 TEX2Q8IWB9 1127 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 KRT35Q92764 455 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 KIF12Q96FN5 646 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 GPBP1L1Q9HC44 474 aaPredicted RBP15.58■□□□□ 0.08
CHD4-201ENST00000357008 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.58■□□□□ 0.08
CHD4-201ENST00000357008 AIM2O14862 343 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 KRT8P05787 483 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 COILP38432 576 aaPredicted RBP15.58■□□□□ 0.08
CHD4-201ENST00000357008 KLHDC7AQ5VTJ3 777 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 TTC39BQ5VTQ0 682 aaPredicted RBP15.58■□□□□ 0.08
CHD4-201ENST00000357008 MYCBPAPQ8TBZ2 947 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 NEUROG2Q9H2A3 272 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 NDFIP2Q9NV92 336 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 PCDHB2Q9Y5E7 798 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 CDC42BPGQ6DT37 1551 aa15.58■□□□□ 0.08
CHD4-201ENST00000357008 PJA2O43164 708 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 DGAT1O75907 488 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 SRP72O76094 671 aaKnown RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 SPRP35270 261 aaPredicted RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 TPI1P60174 286 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 PTK2BQ14289 1009 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 TTLL4Q14679 1199 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 CCDC85BQ15834 202 aaPredicted RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 SNRNP35Q16560 246 aaKnown RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 TAS2R42Q7RTR8 314 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 CDR2LQ86X02 465 aaPredicted RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 E2F7Q96AV8 911 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 NSUN4Q96CB9 384 aaKnown RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 PABPC3Q9H361 631 aaKnown RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 CDY2AQ9Y6F7 541 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 CDY1Q9Y6F8 540 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 NRKQ7Z2Y5 1582 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 ZNF197O14709 1029 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 ZSCAN9O15535 394 aaPredicted RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 CCDC159P0C7I6 412 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 KLK7P49862 253 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 GPSM2P81274 684 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 ITIH4Q14624 930 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 TTC23LQ6PF05 361 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 CLEC4FQ8N1N0 589 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 RBBP8NLQ8NC74 664 aaPredicted RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 MCEEQ96PE7 176 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 P4HA2O15460 535 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 MYL2P10916 166 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 ANTXR2P58335 489 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 ZNF543Q08ER8 600 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 USP10Q14694 798 aaKnown RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 PRPF39Q86UA1 669 aaKnown RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 PLA2G12BQ9BX93 195 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 PLAGL2Q9UPG8 496 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 ARHGEF40Q8TER5 1519 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 TBC1D4O60343 1298 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 MOCS2O96007 188 aaPredicted RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 CYP19A1P11511 503 aaPredicted RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 FNTAP49354 379 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 PMS1P54277 932 aaKnown RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 ARHGEF6Q15052 776 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 LDHDQ86WU2 507 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 PLD3Q8IV08 490 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 LRRC34Q8IZ02 419 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 CCT7Q99832 543 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 C20orf96Q9NUD7 363 aaPredicted RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 COL15A1P39059 1388 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 DFFAO00273 331 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 HNRNPRO43390 633 aaKnown RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 UBTFL6P0CB48 400 aaPredicted RBP15.57■□□□□ 0.08
CHD4-201ENST00000357008 MYBP10242 640 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 LCP1P13796 627 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 ZNF235Q14590 738 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 BTNL9Q6UXG8 535 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 RRM2BQ7LG56 351 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 MDM1Q8TC05 714 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 LRRC7Q96NW7 1537 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 ACAD9Q9H845 621 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 CDYLQ9Y232 598 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 ATP11BQ9Y2G3 1177 aa15.57■□□□□ 0.08
CHD4-201ENST00000357008 TRPM1Q7Z4N2 1603 aa15.56■□□□□ 0.08
CHD4-201ENST00000357008 EIF3DO15371 548 aaKnown RBP eCLIP15.56■□□□□ 0.083e-6■■□□□ 11.7
CHD4-201ENST00000357008 MYL3P08590 195 aa15.56■□□□□ 0.08
CHD4-201ENST00000357008 PRLRP16471 622 aa15.56■□□□□ 0.08
CHD4-201ENST00000357008 S100A5P33763 92 aa15.56■□□□□ 0.08
CHD4-201ENST00000357008 KCNJ1P48048 391 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms