RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 SLC35C1Q96A29 364 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 EEF2KMTQ96G04 330 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 CNOT6LQ96LI5 555 aaKnown RBP17.25■□□□□ 0.35
FDPS-201ENST00000356657 GUCD1Q96NT3 240 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 GOLGA2P5Q9HBQ8 144 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 LMCD1Q9NZU5 365 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 SSX2IPQ9Y2D8 614 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 NUB1Q9Y5A7 615 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 SCN1AP35498 2009 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 CDH23Q9H251 3354 aa17.25■□□□□ 0.35
FDPS-201ENST00000356657 COL4A4P53420 1690 aaPredicted RBP17.25■□□□□ 0.35
FDPS-201ENST00000356657 KIF4AO95239 1232 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 STAU1O95793 577 aaKnown RBP17.24■□□□□ 0.35
FDPS-201ENST00000356657 AARSP49588 968 aaKnown RBP eCLIP17.24■□□□□ 0.35
FDPS-201ENST00000356657 TAF6P49848 677 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 MXI1P50539 228 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 ZNF445P59923 1031 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 CETN1Q12798 172 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 GPM6BQ13491 265 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 PTPROQ16827 1216 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 TCERG1LQ5VWI1 586 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 FUT10Q6P4F1 479 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 C15orf39Q6ZRI6 1047 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 OR5B17Q8NGF7 314 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 PLEKHO2Q8TD55 490 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 MYLIPQ8WY64 445 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 ARNTL2Q8WYA1 636 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 TAF4BQ92750 862 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 CDX2Q99626 313 aaPredicted RBP17.24■□□□□ 0.35
FDPS-201ENST00000356657 IMPG2Q9BZV3 1241 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 MARCH5Q9NX47 278 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 MTUS1Q9ULD2 1270 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.24■□□□□ 0.35
FDPS-201ENST00000356657 PTPRJQ12913 1337 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 BECN2A8MW95 431 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 SYN3O14994 580 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 PHACTR2O75167 634 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 EFEMP2O95967 443 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 SOD2P04179 222 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 ITGB3P05106 788 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 ITGB1P05556 798 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 FOSL2P15408 326 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 TPM4P67936 248 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 BIRC3Q13489 604 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 TRPC3Q13507 836 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 GRIN2CQ14957 1233 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 DCAF17Q5H9S7 520 aaPredicted RBP17.24■□□□□ 0.35
FDPS-201ENST00000356657 CDKAL1Q5VV42 579 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 RNF168Q8IYW5 571 aaPredicted RBP17.24■□□□□ 0.35
FDPS-201ENST00000356657 CXorf38Q8TB03 319 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 SPATA18Q8TC71 538 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 FAM200AQ8TCP9 573 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 FAXDC2Q96IV6 333 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 PAAF1Q9BRP4 392 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 VRTNQ9H8Y1 702 aa17.24■□□□□ 0.35
FDPS-201ENST00000356657 FSD2A1L4K1 749 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 C4BPAP04003 597 aaKnown RBP17.23■□□□□ 0.35
FDPS-201ENST00000356657 TPM2P07951 284 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 POLR2BP30876 1174 aaKnown RBP17.23■□□□□ 0.35
FDPS-201ENST00000356657 PBX3P40426 434 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 LILRA4P59901 499 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 DLG4P78352 724 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 CREMQ03060 361 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 USP41Q3LFD5 358 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 C1orf220Q5T0J3 134 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.23■□□□□ 0.35
FDPS-201ENST00000356657 SV2AQ7L0J3 742 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 TMEM173Q86WV6 379 aaPredicted RBP17.23■□□□□ 0.35
FDPS-201ENST00000356657 CCDC150Q8NCX0 1101 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 SPPL3Q8TCT6 385 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 SUSD3Q96L08 255 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 GAS2L1Q99501 681 aaPredicted RBP17.23■□□□□ 0.35
FDPS-201ENST00000356657 POP1Q99575 1024 aaKnown RBP17.23■□□□□ 0.35
FDPS-201ENST00000356657 HERC2P3Q9BVR0 1158 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 OXCT2Q9BYC2 517 aaPredicted RBP17.23■□□□□ 0.35
FDPS-201ENST00000356657 PRDM12Q9H4Q4 367 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 NGRNQ9NPE2 291 aaKnown RBP17.23■□□□□ 0.35
FDPS-201ENST00000356657 TLR9Q9NR96 1032 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 SIX4Q9UIU6 781 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 DSEQ9UL01 958 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 AGAP1Q9UPQ3 857 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 STXBP5LQ9Y2K9 1186 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 IRAK3Q9Y616 596 aa17.23■□□□□ 0.35
FDPS-201ENST00000356657 NT5C1B-RDH14C9J2C7 533 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 M0QZQ0 153 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
FDPS-201ENST00000356657 KRT19P08727 400 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 TRIM49P0CI25 452 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 TRIM49CP0CI26 452 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 MTIF2P46199 727 aaKnown RBP17.22■□□□□ 0.35
FDPS-201ENST00000356657 NCOA4Q13772 614 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 MAN2A1Q16706 1144 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 TCP11X2Q5H9J9 407 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 TDRD10Q5VZ19 366 aaKnown RBP17.22■□□□□ 0.35
FDPS-201ENST00000356657 LMBRD2Q68DH5 695 aaPredicted RBP17.22■□□□□ 0.35
FDPS-201ENST00000356657 IRF2BP1Q8IU81 584 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 AOPEPQ8N6M6 819 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 C3orf58Q8NDZ4 430 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 FBXL13Q8NEE6 735 aa17.22■□□□□ 0.35
FDPS-201ENST00000356657 APPL2Q8NEU8 664 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms