RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 TRPC3Q13507 836 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 C1orf220Q5T0J3 134 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 KRT39Q6A163 491 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 SV2AQ7L0J3 742 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 RABGGTAQ92696 567 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 ZNF560Q96MR9 790 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 CERS4Q9HA82 394 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 CACNG4Q9UBN1 327 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 AGAP1Q9UPQ3 857 aa16.77■□□□□ 0.27
TRIM13-201ENST00000356017 GBF1Q92538 1859 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 KCNJ18B7U540 433 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 PRKCSHP14314 528 aaPredicted RBP16.76■□□□□ 0.27
TRIM13-201ENST00000356017 POLR2BP30876 1174 aaKnown RBP16.76■□□□□ 0.27
TRIM13-201ENST00000356017 MTIF2P46199 727 aaKnown RBP16.76■□□□□ 0.27
TRIM13-201ENST00000356017 GCLMP48507 274 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 TPM4P67936 248 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 PPP3CAQ08209 521 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 MYO1EQ12965 1108 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 GPM6BQ13491 265 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 KCNJ12Q14500 433 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 BMS1Q14692 1282 aaKnown RBP16.76■□□□□ 0.27
TRIM13-201ENST00000356017 NCAPHQ15003 741 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 CDKAL1Q5VV42 579 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 TDRD10Q5VZ19 366 aaKnown RBP16.76■□□□□ 0.27
TRIM13-201ENST00000356017 C15orf39Q6ZRI6 1047 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 SPRED2Q7Z698 418 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 DDX53Q86TM3 631 aaKnown RBP16.76■□□□□ 0.27
TRIM13-201ENST00000356017 TMEM173Q86WV6 379 aaPredicted RBP16.76■□□□□ 0.27
TRIM13-201ENST00000356017 ANKRD20A12PQ8NF67 263 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 FAM200AQ8TCP9 573 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 LRCH3Q96II8 777 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 MARCH5Q9NX47 278 aa16.76■□□□□ 0.27
TRIM13-201ENST00000356017 TRIOBPQ9H2D6 2365 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 N4BP1O75113 896 aaKnown RBP16.75■□□□□ 0.27
TRIM13-201ENST00000356017 ITGB1P05556 798 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 ATICP31939 592 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 TAF6P49848 677 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 MXI1P50539 228 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 LILRA4P59901 499 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 CETN1Q12798 172 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 IQCB1Q15051 598 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 SV2CQ496J9 727 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 TCP11X2Q5H9J9 407 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 DHX40Q8IX18 779 aaKnown RBP16.75■□□□□ 0.27
TRIM13-201ENST00000356017 CXorf38Q8TB03 319 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 CBX8Q9HC52 389 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 SIX4Q9UIU6 781 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 ANK1P16157 1881 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 TRIP11Q15643 1979 aa16.75■□□□□ 0.27
TRIM13-201ENST00000356017 ARHGEF37A1IGU5 675 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 PMM2O15305 246 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 P4HA2O15460 535 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 TPM2P07951 284 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 CDK11BP21127 795 aaKnown RBP16.74■□□□□ 0.27
TRIM13-201ENST00000356017 KCNH2Q12809 1159 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 NCOA4Q13772 614 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 HSP90AA4PQ58FG1 418 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 FUT10Q6P4F1 479 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 C3orf58Q8NDZ4 430 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 SPPL3Q8TCT6 385 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 HASPINQ8TF76 798 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 BCL7CQ8WUZ0 217 aaPredicted RBP16.74■□□□□ 0.27
TRIM13-201ENST00000356017 TUBGCP2Q9BSJ2 902 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 TTYH1Q9H313 450 aaPredicted RBP16.74■□□□□ 0.27
TRIM13-201ENST00000356017 MMRN2Q9H8L6 949 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 ALG13Q9NP73 1137 aaKnown RBP16.74■□□□□ 0.27
TRIM13-201ENST00000356017 PDCD11Q14690 1871 aaKnown RBP16.74■□□□□ 0.27
TRIM13-201ENST00000356017 KPNA7A9QM74 516 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 F8W810 466 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 GOLGA6L19H0YKK7 550 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 STAU1O95793 577 aaKnown RBP16.74■□□□□ 0.27
TRIM13-201ENST00000356017 CST3P01034 146 aaPredicted RBP16.74■□□□□ 0.27
TRIM13-201ENST00000356017 AFPP02771 609 aaKnown RBP16.74■□□□□ 0.27
TRIM13-201ENST00000356017 SOD2P04179 222 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 FMO5P49326 533 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 AARSP49588 968 aaKnown RBP eCLIP16.74■□□□□ 0.278e-6■■■■■ 52.4
TRIM13-201ENST00000356017 MAN2A1Q16706 1144 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 SGSM1Q2NKQ1 1148 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 CD300LGQ6UXG3 332 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 CCDC150Q8NCX0 1101 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 FBXL13Q8NEE6 735 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 POF1BQ8WVV4 589 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 TAF4BQ92750 862 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 HPDLQ96IR7 371 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 FAM84AQ96KN4 292 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 SUSD3Q96L08 255 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 IMPG2Q9BZV3 1241 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 LMAN2LQ9H0V9 348 aa16.74■□□□□ 0.27
TRIM13-201ENST00000356017 PPEF2O14830 753 aa16.73■□□□□ 0.27
TRIM13-201ENST00000356017 EFEMP2O95967 443 aa16.73■□□□□ 0.27
TRIM13-201ENST00000356017 ZNF18P17022 549 aa16.73■□□□□ 0.27
TRIM13-201ENST00000356017 PIK3CAP42336 1068 aa16.73■□□□□ 0.27
TRIM13-201ENST00000356017 PTPROQ16827 1216 aa16.73■□□□□ 0.27
TRIM13-201ENST00000356017 USP41Q3LFD5 358 aa16.73■□□□□ 0.27
TRIM13-201ENST00000356017 PDE12Q6L8Q7 609 aaKnown RBP16.73■□□□□ 0.27
TRIM13-201ENST00000356017 KIAA1841Q6NSI8 718 aa16.73■□□□□ 0.27
TRIM13-201ENST00000356017 DSTYKQ6XUX3 929 aa16.73■□□□□ 0.27
TRIM13-201ENST00000356017 RNF168Q8IYW5 571 aaPredicted RBP16.73■□□□□ 0.27
TRIM13-201ENST00000356017 VPS52Q8N1B4 723 aa16.73■□□□□ 0.27
TRIM13-201ENST00000356017 GPR62Q9BZJ7 368 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms