RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 IL2RBP14784 551 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 TGFBR2P37173 567 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 JADE3Q92613 823 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 GPKOWQ92917 476 aaPredicted RBP eCLIP8.4□□□□□ -1.06
SCN8A-201ENST00000354534 CD248Q9HCU0 757 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 ABCB1P08183 1280 aaPredicted RBP8.4□□□□□ -1.06
SCN8A-201ENST00000354534 GAP43P17677 238 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 FGFR4P22455 802 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 SERPINB8P50452 374 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 ME3Q16798 604 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 ATG14Q6ZNE5 492 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 P2RX5Q93086 422 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 F8VZ95 297 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 KHDRBS3O75525 346 aaKnown RBP8.4□□□□□ -1.06
SCN8A-201ENST00000354534 ATG7O95352 703 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 TARSP26639 723 aaKnown RBP8.4□□□□□ -1.06
SCN8A-201ENST00000354534 C21orf59P57076 290 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 CCDC185Q8N715 623 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 OR6B3Q8NGW1 331 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 CYP39A1Q9NYL5 469 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 E7EWF7 191 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 RAD51BO15315 384 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 SKIV2LQ15477 1246 aaKnown RBP8.4□□□□□ -1.06
SCN8A-201ENST00000354534 DPP8Q6V1X1 898 aaPredicted RBP8.4□□□□□ -1.06
SCN8A-201ENST00000354534 ZNF614Q8N883 585 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 PJA1Q8NG27 643 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 ATP6V1G3Q96LB4 118 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 ACAP3Q96P50 834 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 FOXP3Q9BZS1 431 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 PHACTR1Q9C0D0 580 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 N6AMT1Q9Y5N5 214 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 MED23Q9ULK4 1368 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 EFCAB10A6NFE3 127 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 TPST1O60507 370 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 RCVRNP35243 200 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 ORC2Q13416 577 aaPredicted RBP8.4□□□□□ -1.06
SCN8A-201ENST00000354534 CCDC157Q569K6 752 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 CTNNAL1Q9UBT7 734 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.4□□□□□ -1.06
SCN8A-201ENST00000354534 SH3TC1Q8TE82 1336 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 ZNF23P17027 643 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 PRIM2P49643 509 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 DDR2Q16832 855 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 ZNF658Q5TYW1 1059 aaPredicted RBP8.4□□□□□ -1.06
SCN8A-201ENST00000354534 C8orf58Q8NAV2 365 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 SHCBP1Q8NEM2 672 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 OTUD5Q96G74 571 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 HMG20AQ9NP66 347 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 SAMSN1Q9NSI8 373 aaKnown RBP8.4□□□□□ -1.06
SCN8A-201ENST00000354534 DDX18Q9NVP1 670 aaKnown RBP8.4□□□□□ -1.06
SCN8A-201ENST00000354534 CCDC59Q9P031 241 aaKnown RBP8.4□□□□□ -1.06
SCN8A-201ENST00000354534 CHKBQ9Y259 395 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 ACEP12821 1306 aa8.4□□□□□ -1.06
SCN8A-201ENST00000354534 KLHL2O95198 593 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 CLPTM1O96005 669 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 PGK2P07205 417 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 CENPLQ8N0S6 344 aaPredicted RBP8.4□□□□□ -1.07
SCN8A-201ENST00000354534 CARD14Q9BXL6 1004 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 AS3MTQ9HBK9 375 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 RCOR1Q9UKL0 485 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 GCC2Q8IWJ2 1684 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 TCEA3O75764 348 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 ADARP55265 1226 aaKnown RBP8.4□□□□□ -1.07
SCN8A-201ENST00000354534 SCN4BQ8IWT1 228 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 C14orf93Q9H972 538 aaKnown RBP8.4□□□□□ -1.07
SCN8A-201ENST00000354534 ASNSD1Q9NWL6 643 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 SLC25A13Q9UJS0 675 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 E2F8A0AVK6 867 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 MYL2P10916 166 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 GTF2H3Q13889 308 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 PKN2Q16513 984 aaKnown RBP8.4□□□□□ -1.07
SCN8A-201ENST00000354534 C4orf46Q504U0 113 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 ERICH5Q6P6B1 374 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 TTC29Q8NA56 475 aaPredicted RBP8.4□□□□□ -1.07
SCN8A-201ENST00000354534 APOL4Q9BPW4 351 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 NPATQ14207 1427 aa8.4□□□□□ -1.07
SCN8A-201ENST00000354534 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 TNFAIP1Q13829 316 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 SPANXN2Q5MJ10 180 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 DPP9Q86TI2 863 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 RHOT2Q8IXI1 618 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 XAGE2Q96GT9 111 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 KLHL32Q96NJ5 620 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 THUMPD3Q9BV44 507 aaKnown RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 RGS18Q9NS28 235 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 MICAL3Q7RTP6 2002 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 ZNF532Q9HCE3 1301 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 KPNA6O60684 536 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 PCP11498 1178 aaKnown RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 KCNK10P57789 538 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 SYCP2LQ5T4T6 812 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 TRPM8Q7Z2W7 1104 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 GPT2Q8TD30 523 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 USP15Q9Y4E8 981 aaPredicted RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 WDR17Q8IZU2 1322 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 FAM25EA8MYX2 175 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 TRIM66O15016 1216 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 TBC1D12O60347 775 aa8.39□□□□□ -1.07
SCN8A-201ENST00000354534 SSTR3P32745 418 aaPredicted RBP8.39□□□□□ -1.07
SCN8A-201ENST00000354534 CACNB1Q02641 598 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms