RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 SNX27Q96L92 541 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 PLEKHA4Q9H4M7 779 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 PTPRHQ9HD43 1115 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 LIMD1Q9UGP4 676 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 ODF2LQ9ULJ1 636 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 NUB1Q9Y5A7 615 aa12.55□□□□□ -0.4
CDRT1-202ENST00000354433 CLUHO75153 1309 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 SMIM28A0A1B0GU29 152 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 GOLGA6L6A8MZA4 724 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 I3L4J1 428 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 HNRNPDLO14979 420 aaKnown RBP12.54□□□□□ -0.4
CDRT1-202ENST00000354433 CLDN3O15551 220 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 TRAPPC3O43617 180 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 MAPTP10636 758 aaKnown RBP12.54□□□□□ -0.4
CDRT1-202ENST00000354433 BMP6P22004 513 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 LIG4P49917 911 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 AMPD3Q01432 767 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 MCM6Q14566 821 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 KCNB1Q14721 858 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 SEZ6Q53EL9 994 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 DCLRE1AQ6PJP8 1040 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 GET4Q7L5D6 327 aaPredicted RBP12.54□□□□□ -0.4
CDRT1-202ENST00000354433 GPR65Q8IYL9 337 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 ZDHHC14Q8IZN3 488 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 LARP4BQ92615 738 aaKnown RBP12.54□□□□□ -0.4
CDRT1-202ENST00000354433 RAD54LQ92698 747 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 TRIM5Q9C035 493 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 PARVGQ9HBI0 331 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
CDRT1-202ENST00000354433 TMEM189-UBE2V1I3L0A0 370 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 PODXLO00592 558 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 C8AP07357 584 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 PROZP22891 400 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 BRCC3P46736 316 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 NCKAP1LP55160 1127 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 PLCB2Q00722 1185 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 UPP1Q16831 310 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 ARSHQ5FYA8 562 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 ZPBP2Q6X784 338 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 HAUS6Q7Z4H7 955 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 UBALD2Q8IYN6 164 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 C3orf58Q8NDZ4 430 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 LNX1Q8TBB1 728 aaPredicted RBP12.53□□□□□ -0.4
CDRT1-202ENST00000354433 ENOX1Q8TC92 643 aaKnown RBP12.53□□□□□ -0.4
CDRT1-202ENST00000354433 HDAC7Q8WUI4 952 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 NTPCRQ9BSD7 190 aaKnown RBP12.53□□□□□ -0.4
CDRT1-202ENST00000354433 LRRC27Q9C0I9 530 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 SMOC2Q9H3U7 446 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 WDR6Q9NNW5 1121 aaKnown RBP12.53□□□□□ -0.4
CDRT1-202ENST00000354433 ZDHHC7Q9NXF8 308 aa12.53□□□□□ -0.4
CDRT1-202ENST00000354433 ARIH1Q9Y4X5 557 aaPredicted RBP12.53□□□□□ -0.4
CDRT1-202ENST00000354433 ABLIM1O14639 778 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 TECTAO75443 2155 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 RPN1P04843 607 aaKnown RBP12.52□□□□□ -0.4
CDRT1-202ENST00000354433 CXCL8P10145 99 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 TKTP29401 623 aaKnown RBP12.52□□□□□ -0.4
CDRT1-202ENST00000354433 SOX4Q06945 474 aaPredicted RBP12.52□□□□□ -0.4
CDRT1-202ENST00000354433 PPM1LQ5SGD2 360 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 ZNF658Q5TYW1 1059 aaPredicted RBP12.52□□□□□ -0.4
CDRT1-202ENST00000354433 ISM2Q6H9L7 571 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 CYP26C1Q6V0L0 522 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 BMP8AQ7Z5Y6 402 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 FBXL6Q8N531 539 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 LRRC15Q8TF66 581 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 CCDC47Q96A33 483 aaKnown RBP12.52□□□□□ -0.4
CDRT1-202ENST00000354433 DDX27Q96GQ7 796 aaKnown RBP12.52□□□□□ -0.4
CDRT1-202ENST00000354433 ZMAT2Q96NC0 199 aaKnown RBP12.52□□□□□ -0.4
CDRT1-202ENST00000354433 C7orf25Q9BPX7 421 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 CLSTN3Q9BQT9 956 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 BLOC1S4Q9NUP1 217 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 CNTN3Q9P232 1028 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 FBXW11Q9UKB1 542 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 CDY1Q9Y6F8 540 aa12.52□□□□□ -0.4
CDRT1-202ENST00000354433 ZMYND10O75800 440 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 PTMAP06454 111 aaKnown RBP12.52□□□□□ -0.41
CDRT1-202ENST00000354433 OR1D2P34982 312 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 PPP2R3AQ06190 1150 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 MCL1Q07820 350 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 CUL4BQ13620 913 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 CNNM4Q6P4Q7 775 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 ANKS3Q6ZW76 656 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 ZSCAN30Q86W11 494 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 SLC7A14Q8TBB6 771 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 C18orf25Q96B23 403 aaPredicted RBP12.52□□□□□ -0.41
CDRT1-202ENST00000354433 ZNF707Q96C28 371 aaPredicted RBP12.52□□□□□ -0.41
CDRT1-202ENST00000354433 ASIC4Q96FT7 647 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 PRKD2Q9BZL6 878 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 MFSD1Q9H3U5 465 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 MTRRQ9UBK8 725 aa12.52□□□□□ -0.41
CDRT1-202ENST00000354433 PLXNA3P51805 1871 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 ADAM12O43184 909 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 C1RP00736 705 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 PDGFBP01127 241 aaPredicted RBP12.51□□□□□ -0.41
CDRT1-202ENST00000354433 KCNE1P15382 129 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 FGFR3P22607 806 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 IGFBP6P24592 240 aaPredicted RBP12.51□□□□□ -0.41
CDRT1-202ENST00000354433 PPP1R2P41236 205 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 SPAG1Q07617 926 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 XKR4Q5GH76 650 aa12.51□□□□□ -0.41
CDRT1-202ENST00000354433 LILRA6Q6PI73 481 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms