RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 TCEAL8Q8IYN2 117 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 COL26A1Q96A83 441 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 CCDC43Q96MW1 224 aaKnown RBP17.47■□□□□ 0.39
DDX55-202ENST00000354291 ADAM33Q9BZ11 813 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 POLR3FQ9H1D9 316 aaPredicted RBP17.47■□□□□ 0.39
DDX55-202ENST00000354291 KCNMB3Q9NPA1 279 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 VPS45Q9NRW7 570 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 PRMT7Q9NVM4 692 aaPredicted RBP17.47■□□□□ 0.39
DDX55-202ENST00000354291 USP20Q9Y2K6 914 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 INSL5Q9Y5Q6 135 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 SETXQ7Z333 2677 aaKnown RBP17.47■□□□□ 0.39
DDX55-202ENST00000354291 GREB1Q4ZG55 1949 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 NCANO14594 1321 aa17.47■□□□□ 0.39
DDX55-202ENST00000354291 WDFY3Q8IZQ1 3526 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 M0R2N6 131 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 N4BP3O15049 544 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 DGAT1O75907 488 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 SLITRK3O94933 977 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 PRKCBP05771 671 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 LIG1P18858 919 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 ERICH6BQ5W0A0 696 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 PPP4R3AQ6IN85 833 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 SLC8B1Q6J4K2 584 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 CPLX2Q6PUV4 134 aaKnown RBP17.46■□□□□ 0.39
DDX55-202ENST00000354291 HAS1Q92839 578 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 RSPRY1Q96DX4 576 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 PDZD7Q9H5P4 517 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 TRPV4Q9HBA0 871 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 GOLGA2P5Q9HBQ8 144 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 PPP4R2Q9NY27 417 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 PCDHGA5Q9Y5G8 931 aa17.46■□□□□ 0.39
DDX55-202ENST00000354291 A0A087WWV3 80 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 MYBPHLA2RUH7 354 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 TMEM8BA6NDV4 472 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 TMEM189-UBE2V1I3L0A0 370 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 CHADO15335 359 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 CCNT1O60563 726 aaKnown RBP17.45■□□□□ 0.38
DDX55-202ENST00000354291 CTHP32929 405 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 TWF1Q12792 350 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 UPP1Q16831 310 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 SH3PXD2AQ5TCZ1 1133 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 KRT25Q7Z3Z0 450 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 RALGPS2Q86X27 583 aaPredicted RBP17.45■□□□□ 0.38
DDX55-202ENST00000354291 FAM177A1Q8N128 213 aaPredicted RBP17.45■□□□□ 0.38
DDX55-202ENST00000354291 E2F7Q96AV8 911 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 PRIMPOLQ96LW4 560 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 EDEM2Q9BV94 578 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 ASAH2Q9NR71 780 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 CEP72Q9P209 647 aa17.45■□□□□ 0.38
DDX55-202ENST00000354291 SPAG17Q6Q759 2223 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 DEXIO95424 95 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 RBM25P49756 843 aaKnown RBP17.44■□□□□ 0.38
DDX55-202ENST00000354291 PRPF4BQ13523 1007 aaKnown RBP17.44■□□□□ 0.38
DDX55-202ENST00000354291 DAB2IPQ5VWQ8 1189 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 ZBTB8OSQ8IWT0 167 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 C3orf58Q8NDZ4 430 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 ZCCHC14Q8WYQ9 949 aaKnown RBP17.44■□□□□ 0.38
DDX55-202ENST00000354291 ZFYVE19Q96K21 471 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 ADPGKQ9BRR6 497 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 SCNM1Q9BWG6 230 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 TMEM121BQ9BXQ6 578 aaPredicted RBP17.44■□□□□ 0.38
DDX55-202ENST00000354291 GPR88Q9GZN0 384 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 FZD8Q9H461 694 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 GPRC5CQ9NQ84 441 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 ANKEF1Q9NU02 776 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 PDRG1Q9NUG6 133 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 GTSE1Q9NYZ3 720 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 SLC8A2Q9UPR5 921 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 WASF3Q9UPY6 502 aa17.44■□□□□ 0.38
DDX55-202ENST00000354291 CCDC194A0A1B0GVG4 234 aa17.43■□□□□ 0.38
DDX55-202ENST00000354291 USO1O60763 962 aaKnown RBP17.43■□□□□ 0.38
DDX55-202ENST00000354291 CCINQ13939 588 aa17.43■□□□□ 0.38
DDX55-202ENST00000354291 PKN3Q6P5Z2 889 aa17.43■□□□□ 0.38
DDX55-202ENST00000354291 SYNPOQ8N3V7 929 aa17.43■□□□□ 0.38
DDX55-202ENST00000354291 SHKBP1Q8TBC3 707 aa17.43■□□□□ 0.38
DDX55-202ENST00000354291 PIGOQ8TEQ8 1089 aa17.43■□□□□ 0.38
DDX55-202ENST00000354291 UROC1Q96N76 676 aa17.43■□□□□ 0.38
DDX55-202ENST00000354291 PPP1R10Q96QC0 940 aaKnown RBP17.43■□□□□ 0.38
DDX55-202ENST00000354291 EIF2AK1Q9BQI3 630 aaKnown RBP17.43■□□□□ 0.38
DDX55-202ENST00000354291 FBXL5Q9UKA1 691 aa17.43■□□□□ 0.38
DDX55-202ENST00000354291 H7C4K7 107 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 DPYSL4O14531 572 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 BAG4O95429 457 aaKnown RBP17.42■□□□□ 0.38
DDX55-202ENST00000354291 CREB5Q02930 508 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 FCHO2Q0JRZ9 810 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 STK3Q13188 491 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 NPY5RQ15761 445 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 CTXN3Q4LDR2 81 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 EEF1DP3Q658K8 133 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 TPGS2Q68CL5 300 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 GALNT17Q6IS24 598 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 NEK8Q86SG6 692 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 LEMD2Q8NC56 503 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 DAGLBQ8NCG7 672 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 GATA6Q92908 595 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 ZC3H10Q96K80 434 aaKnown RBP17.42■□□□□ 0.38
DDX55-202ENST00000354291 AIFM3Q96NN9 605 aa17.42■□□□□ 0.38
DDX55-202ENST00000354291 LARP6Q9BRS8 491 aaKnown RBP17.42■□□□□ 0.38
DDX55-202ENST00000354291 KCNJ14Q9UNX9 436 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms