RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 DYDC2Q96IM9 177 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 SNX22Q96L94 193 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 ALPK1Q96QP1 1244 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 OR10A5Q9H207 317 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 TTYH1Q9H313 450 aaPredicted RBP1.92□□□□□ -2.1
BRCA1-202ENST00000354071 MRGBPQ9NV56 204 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 ZFP69BQ9UJL9 534 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 NCAPD3P42695 1498 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 ABHD16AO95870 558 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 HSD3B1P14060 373 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 PECAM1P16284 738 aaPredicted RBP1.92□□□□□ -2.1
BRCA1-202ENST00000354071 DDCP20711 480 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 KLRK1P26718 216 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 NOMO3P69849 1222 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 DCAF12L1Q5VU92 463 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 RSPH3Q86UC2 560 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 NME9Q86XW9 330 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 SLC15A4Q8N697 577 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 GPR156Q8NFN8 814 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 SLC35B2Q8TB61 432 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 MDM1Q8TC05 714 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 CEP95Q96GE4 821 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 PPM1MQ96MI6 270 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 GDF15Q99988 308 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 CNPPD1Q9BV87 410 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 DDX24Q9GZR7 859 aaKnown RBP eCLIP1.92□□□□□ -2.1
BRCA1-202ENST00000354071 TNFRSF12AQ9NP84 129 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 DTLQ9NZJ0 730 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 CEP72Q9P209 647 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 TRPS1Q9UHF7 1281 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 GJD2Q9UKL4 321 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 KIAA0586Q9BVV6 1533 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 ZNF142P52746 1687 aaPredicted RBP1.92□□□□□ -2.1
BRCA1-202ENST00000354071 EIF4G3O43432 1585 aaKnown RBP1.92□□□□□ -2.1
BRCA1-202ENST00000354071 A0A1W2PR48 441 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 TCRBV7S2A1N4TA0A589 114 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 FCHO1O14526 889 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 IGLV1-40P01703 118 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 ALADP13716 330 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 EN2P19622 333 aaPredicted RBP1.92□□□□□ -2.1
BRCA1-202ENST00000354071 GABRB3P28472 473 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 ZNF200P98182 395 aaPredicted RBP1.92□□□□□ -2.1
BRCA1-202ENST00000354071 DLGAP5Q15398 846 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 TAF12Q16514 161 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 FAM110CQ1W6H9 321 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 TMTC4Q5T4D3 741 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 SLC9C2Q5TAH2 1124 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 UBE3BQ7Z3V4 1068 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 Q8N3U1 123 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 SEC14L1Q92503 715 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 TRIM63Q969Q1 353 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 HRASLS5Q96KN8 279 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 ZSCAN31Q96LW9 406 aaPredicted RBP1.92□□□□□ -2.1
BRCA1-202ENST00000354071 KCNC2Q96PR1 638 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 SERINC2Q96SA4 455 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 RIC8AQ9NPQ8 531 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 GALNT8Q9NY28 637 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 LMCD1Q9NZU5 365 aa1.92□□□□□ -2.1
BRCA1-202ENST00000354071 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.92□□□□□ -2.1
BRCA1-202ENST00000354071 SYNDIG1LA6NDD5 238 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 H7C4K7 107 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 EXOC5O00471 708 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 TCERG1O14776 1098 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 FRS3O43559 492 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 ITGA10O75578 1167 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 DNAJB5O75953 348 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CYP21A2P08686 494 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 GAAP10253 952 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 GLULP15104 373 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 ITGB5P18084 799 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 WASP42768 502 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PSMC1P62191 440 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 NUCB1Q02818 461 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 MTM1Q13496 603 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 BTBD16Q32M84 506 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CRB2Q5IJ48 1285 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 PRAMEF14Q5SWL7 426 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 INTS11Q5TA45 600 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 HAUS3Q68CZ6 603 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CRTC1Q6UUV9 634 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CD300LDQ6UXZ3 194 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 NLRX1Q86UT6 975 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 DCP2Q8IU60 420 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CFHR4Q92496 578 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 IQCDQ96DY2 449 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 MCRS1Q96EZ8 462 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 DDX11Q96FC9 970 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 MAELQ96JY0 434 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 KRTAP4-7Q9BYR0 210 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 AGXT2Q9BYV1 514 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 HAPLN2Q9GZV7 340 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 KIAA1683Q9H0B3 1180 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 AP5M1Q9H0R1 490 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CHST8Q9H2A9 424 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 BRD9Q9H8M2 597 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 UBN1Q9NPG3 1134 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 POLG2Q9UHN1 485 aa1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CTDP1Q9Y5B0 961 aaPredicted RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CFAP20Q9Y6A4 193 aaKnown RBP1.91□□□□□ -2.1
BRCA1-202ENST00000354071 CARMIL2Q6F5E8 1435 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms