RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ELMSAN1Q6PJG2 1045 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 SV2AQ7L0J3 742 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 TTC13Q8NBP0 860 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 PCSK9Q8NBP7 692 aaKnown RBP14.49□□□□□ -0.09
SMC6-201ENST00000351948 SPATA4Q8NEY3 305 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 MTMR9Q96QG7 549 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 RNF208Q9H0X6 261 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 PLEKHA5Q9HAU0 1116 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 SP110Q9HB58 689 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 TJP2Q9UDY2 1190 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 HPCAL4Q9UM19 191 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 UBQLN1Q9UMX0 589 aaKnown RBP14.49□□□□□ -0.09
SMC6-201ENST00000351948 PLAAQ9Y263 795 aa14.49□□□□□ -0.09
SMC6-201ENST00000351948 COL14A1Q05707 1796 aaKnown RBP14.49□□□□□ -0.09
SMC6-201ENST00000351948 PODXLO00592 558 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 TBC1D12O60347 775 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 EGFRP00533 1210 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 KRT14P02533 472 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 ACO1P21399 889 aaKnown RBP14.48□□□□□ -0.09
SMC6-201ENST00000351948 ALDH7A1P49419 539 aaKnown RBP14.48□□□□□ -0.09
SMC6-201ENST00000351948 KCTD17Q8N5Z5 321 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 PPM1EQ8WY54 764 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 MOSPD1Q9UJG1 213 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 SLC8A2Q9UPR5 921 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 PPP1R11O60927 126 aaPredicted RBP14.48□□□□□ -0.09
SMC6-201ENST00000351948 ALDH1A1P00352 501 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 RALAP11233 206 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 AKR1A1P14550 325 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 ROR1Q01973 937 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 ARRDC4Q8NCT1 418 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 TINF2Q9BSI4 451 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 METTL5Q9NRN9 209 aaKnown RBP14.48□□□□□ -0.09
SMC6-201ENST00000351948 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.48□□□□□ -0.09
SMC6-201ENST00000351948 EHD2Q9NZN4 543 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 NAGPAQ9UK23 515 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 NEMP1O14524 444 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 GPR182O15218 404 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 CIB2O75838 187 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 CA4P22748 312 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 TPI1P60174 286 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 MFSD10Q14728 455 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 FSCN1Q16658 493 aaKnown RBP14.48□□□□□ -0.09
SMC6-201ENST00000351948 CHADLQ6NUI6 762 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 EFCAB13Q8IY85 973 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 SAMD3Q8N6K7 520 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 ALKBH8Q96BT7 664 aaKnown RBP14.48□□□□□ -0.09
SMC6-201ENST00000351948 PACSIN1Q9BY11 444 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 LMCD1Q9NZU5 365 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 CASP5P51878 434 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 ARL4CP56559 192 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 RGMBQ6NW40 437 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 CACNA2D3Q8IZS8 1091 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 CCDC33Q8N5R6 958 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 WHAMMQ8TF30 809 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 SNX12Q9UMY4 172 aa14.48□□□□□ -0.09
SMC6-201ENST00000351948 CHD2O14647 1828 aaKnown RBP14.48□□□□□ -0.09
SMC6-201ENST00000351948 LGALS2P05162 132 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 PCSK1P29120 753 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 SLC12A1Q13621 1099 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 TRIM51Q9BSJ1 452 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 LRRC1Q9BTT6 524 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 FAM8A1Q9UBU6 413 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 GJB1P08034 283 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 SLC26A2P50443 739 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 ARSEP51690 589 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 EIF3EP60228 445 aaKnown RBP14.47□□□□□ -0.09
SMC6-201ENST00000351948 IL17AQ16552 155 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 TRAPPC11Q7Z392 1133 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 SH3TC2Q8TF17 1288 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 TATDN2Q93075 761 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 TAF1DQ9H5J8 278 aaPredicted RBP14.47□□□□□ -0.09
SMC6-201ENST00000351948 PDGFCQ9NRA1 345 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 TACC3Q9Y6A5 838 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 NCAM1P13591 858 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 DNAJB2P25686 324 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 CYP24A1Q07973 514 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 CUL1Q13616 776 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 DEFB115Q30KQ5 88 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 DCAF4L1Q3SXM0 396 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 TMEM119Q4V9L6 283 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 ELOA2Q8IYF1 753 aaPredicted RBP14.47□□□□□ -0.09
SMC6-201ENST00000351948 ZBED8Q8IZ13 594 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 IFT43Q96FT9 208 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 VTA1Q9NP79 307 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 DBR1Q9UK59 544 aaKnown RBP14.47□□□□□ -0.09
SMC6-201ENST00000351948 ALG6Q9Y672 507 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 SLIT2O94813 1529 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 H3BRJ5 948 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 KCNJ1P48048 391 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 SLC20A1Q8WUM9 679 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 ATXN7L3BQ96GX2 97 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 NUDCD1Q96RS6 583 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 DIS3Q9Y2L1 958 aaKnown RBP14.47□□□□□ -0.09
SMC6-201ENST00000351948 MRFAP1Q9Y605 127 aa14.47□□□□□ -0.09
SMC6-201ENST00000351948 ATP9BO43861 1147 aa14.46□□□□□ -0.09
SMC6-201ENST00000351948 KRT17Q04695 432 aa14.46□□□□□ -0.09
SMC6-201ENST00000351948 NCAPHQ15003 741 aa14.46□□□□□ -0.09
SMC6-201ENST00000351948 GPR142Q7Z601 462 aa14.46□□□□□ -0.09
SMC6-201ENST00000351948 NMRK2Q9NPI5 230 aa14.46□□□□□ -0.09
SMC6-201ENST00000351948 ANGPTL3Q9Y5C1 460 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms