RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 NIF3L1Q9GZT8 377 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 CARD9Q9H257 536 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 ASB7Q9H672 318 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 VRTNQ9H8Y1 702 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 RPF1Q9H9Y2 349 aaKnown RBP7.41□□□□□ -1.22
TRIM55-203ENST00000350034 DMGDHQ9UI17 866 aaKnown RBP7.41□□□□□ -1.22
TRIM55-203ENST00000350034 ALG6Q9Y672 507 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 PLXNA1Q9UIW2 1896 aa7.41□□□□□ -1.22
TRIM55-203ENST00000350034 UNC80Q8N2C7 3258 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 A0A1B0GUA9 196 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 SMIM35A0A1B0GVV1 85 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 CCDC188H7C350 402 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 PGRMC1O00264 195 aaKnown RBP7.4□□□□□ -1.22
TRIM55-203ENST00000350034 DYNC1LI2O43237 492 aaPredicted RBP7.4□□□□□ -1.22
TRIM55-203ENST00000350034 CEP104O60308 925 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 TSPAN1O60635 241 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 GPR32O75388 356 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 STAU1O95793 577 aaKnown RBP7.4□□□□□ -1.22
TRIM55-203ENST00000350034 CALCAP01258 141 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 TNNC2P02585 160 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 VTNP04004 478 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 STAG3L1P0CL83 205 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 SMIM10L2AP0DMW4 78 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 SMIM10L2BP0DMW5 78 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 MYBL1P10243 752 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 CTNNA2P26232 953 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 HOXC8P31273 242 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 CDH5P33151 784 aaPredicted RBP7.4□□□□□ -1.22
TRIM55-203ENST00000350034 RGS2P41220 211 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 ASPAP45381 313 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 PEX5P50542 639 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 NOMO3P69849 1222 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 NKX3-2P78367 333 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 CDC42EP1Q00587 391 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 PTP4A2Q12974 167 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 SLC10A6Q3KNW5 377 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 PRAMEF19Q5SWL8 479 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 DCAF12L1Q5VU92 463 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 CCDC70Q6NSX1 233 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 PPP1R2P3Q6NXS1 205 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 TMEM270Q6UE05 265 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 MON1BQ7L1V2 547 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 HDXQ7Z353 690 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 TLK2Q86UE8 772 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 PHF13Q86YI8 300 aaPredicted RBP7.4□□□□□ -1.22
TRIM55-203ENST00000350034 TMEM192Q8IY95 271 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 KRT222Q8N1A0 295 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 EIF1ADQ8N9N8 165 aaKnown RBP7.4□□□□□ -1.22
TRIM55-203ENST00000350034 AENQ8WTP8 325 aaKnown RBP7.4□□□□□ -1.22
TRIM55-203ENST00000350034 HDAC7Q8WUI4 952 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 SOCS4Q8WXH5 440 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 ALG3Q92685 438 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 ZNF653Q96CK0 615 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 TRIM11Q96F44 468 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 VCPIP1Q96JH7 1222 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 APBA2Q99767 749 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 NUP85Q9BW27 656 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 COL25A1Q9BXS0 654 aaPredicted RBP7.4□□□□□ -1.22
TRIM55-203ENST00000350034 BCO2Q9BYV7 579 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 WNT8AQ9H1J5 351 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 GDF3Q9NR23 364 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 SETD4Q9NVD3 440 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 CTTNBP2NLQ9P2B4 639 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 SIX4Q9UIU6 781 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 AKT3Q9Y243 479 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 NOC2LQ9Y3T9 749 aaKnown RBP7.4□□□□□ -1.22
TRIM55-203ENST00000350034 PCDHB4Q9Y5E5 795 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 TLL2Q9Y6L7 1015 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 NRCAMQ92823 1304 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 THSD7BQ9C0I4 1608 aa7.4□□□□□ -1.22
TRIM55-203ENST00000350034 TCRBV5S1A1TA0A578 114 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 SPDYE4A6NLX3 237 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 LACTBL1A8MY62 500 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 CLSTN1O94985 981 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 CFHP08603 1231 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 NFICP08651 508 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 TMEM191BP0C7N4 346 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 CXCL8P10145 99 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 MYBL2P10244 700 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 COMTP21964 271 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 CTGFP29279 349 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 GNA15P30679 374 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 HOXA11P31270 313 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-203ENST00000350034 ATICP31939 592 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 GRM5P41594 1212 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 TM4SF4P48230 202 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 DNA2P51530 1060 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 TNNC1P63316 161 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 TFAMQ00059 246 aaKnown RBP7.39□□□□□ -1.23
TRIM55-203ENST00000350034 TRPC3Q13507 836 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 HIC1Q14526 733 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 CASP8Q14790 479 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 PCBP1Q15365 356 aaKnown RBP eCLIP7.39□□□□□ -1.23
TRIM55-203ENST00000350034 CLUL1Q15846 466 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 CCL14Q16627 93 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 MAP9Q49MG5 647 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 NAA35Q5VZE5 725 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 PLEKHA7Q6IQ23 1121 aa7.39□□□□□ -1.23
TRIM55-203ENST00000350034 CDR2LQ86X02 465 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-203ENST00000350034 NT5DC4Q86YG4 428 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms