RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 Q6ZS52 159 aa17.29■□□□□ 0.36
COPE-202ENST00000349893 ZSCAN18Q8TBC5 510 aaPredicted RBP17.29■□□□□ 0.36
COPE-202ENST00000349893 TNFRSF25Q93038 417 aa17.29■□□□□ 0.36
COPE-202ENST00000349893 GPR88Q9GZN0 384 aa17.29■□□□□ 0.36
COPE-202ENST00000349893 TTC12Q9H892 705 aaPredicted RBP17.29■□□□□ 0.36
COPE-202ENST00000349893 GOLGA2P5Q9HBQ8 144 aa17.29■□□□□ 0.36
COPE-202ENST00000349893 RBM12Q9NTZ6 932 aaKnown RBP17.29■□□□□ 0.36
COPE-202ENST00000349893 C2orf42Q9NWW7 574 aa17.29■□□□□ 0.36
COPE-202ENST00000349893 CEP72Q9P209 647 aa17.29■□□□□ 0.36
COPE-202ENST00000349893 SMIM28A0A1B0GU29 152 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 HEPACAM2A8MVW5 462 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 H7C4K7 107 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 EPN2O95208 641 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 SPATA31C1P0DKV0 1188 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 NAMPTP43490 491 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 CCINQ13939 588 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 SF3A2Q15428 464 aaKnown RBP17.28■□□□□ 0.36
COPE-202ENST00000349893 PLA2G2CQ5R387 149 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 IQCEQ6IPM2 695 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 HS6ST3Q8IZP7 471 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 SYNPOQ8N3V7 929 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 RSPRY1Q96DX4 576 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 RXFP3Q9NSD7 469 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 GJB4Q9NTQ9 266 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 FBXL5Q9UKA1 691 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 USP20Q9Y2K6 914 aa17.28■□□□□ 0.36
COPE-202ENST00000349893 FASNP49327 2511 aaKnown RBP17.28■□□□□ 0.36
COPE-202ENST00000349893 SDK1Q7Z5N4 2213 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 CCDC163A0A0D9SF12 145 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 FAM205CA6NFA0 338 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 XBP1P17861 261 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 ATP2B1P20020 1258 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 CALCRLQ16602 461 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 STPG1Q5TH74 334 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 TXNDC11Q6PKC3 985 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 CEP68Q76N32 757 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 MAEAQ7L5Y9 396 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 RALGPS2Q86X27 583 aaPredicted RBP17.27■□□□□ 0.36
COPE-202ENST00000349893 ELMOD1Q8N336 334 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 CSGALNACT1Q8TDX6 532 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 ZNF512Q96ME7 567 aaPredicted RBP17.27■□□□□ 0.36
COPE-202ENST00000349893 MTMR9Q96QG7 549 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 LSM14BQ9BX40 385 aaKnown RBP17.27■□□□□ 0.36
COPE-202ENST00000349893 LRRC3Q9BY71 257 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 ASAH2Q9NR71 780 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 SLC38A7Q9NVC3 462 aa17.27■□□□□ 0.36
COPE-202ENST00000349893 AFF4Q9UHB7 1163 aaKnown RBP17.27■□□□□ 0.36
COPE-202ENST00000349893 A0A087WWV3 80 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 SPECC1L-ADORA2AF8WAN1 911 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 CDKL5O76039 1030 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 CTHP32929 405 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 EFNA5P52803 228 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 TWF1Q12792 350 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 TEAD2Q15562 447 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 TMEM132AQ24JP5 1023 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 NT5DC1Q5TFE4 455 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 ATF7IP2Q5U623 682 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 HEATR6Q6AI08 1181 aaKnown RBP17.26■□□□□ 0.35
COPE-202ENST00000349893 SKAP1Q86WV1 359 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 C12orf50Q8NA57 414 aaPredicted RBP17.26■□□□□ 0.35
COPE-202ENST00000349893 BEST2Q8NFU1 509 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 SHKBP1Q8TBC3 707 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 GAB3Q8WWW8 586 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 ARRDC1-AS1Q9H2J1 176 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 TUFT1Q9NNX1 390 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 PCDHGA5Q9Y5G8 931 aa17.26■□□□□ 0.35
COPE-202ENST00000349893 PKD1L2Q7Z442 2459 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 DMXL2Q8TDJ6 3036 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 DSPP15924 2871 aaKnown RBP17.25■□□□□ 0.35
COPE-202ENST00000349893 SLC38A8A6NNN8 435 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 PODXLO00592 558 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 KCNK5O95279 499 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 GJA1P17302 382 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 CYP11B2P19099 503 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 KCNA4P22459 653 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 GRM5P41594 1212 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 SOX9P48436 509 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 NR5A1Q13285 461 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 COL9A2Q14055 689 aaPredicted RBP17.25■□□□□ 0.35
COPE-202ENST00000349893 PPP2R5AQ15172 486 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 CATSPER3Q86XQ3 398 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 KDF1Q8NAX2 398 aaPredicted RBP17.25■□□□□ 0.35
COPE-202ENST00000349893 SUSD3Q96L08 255 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 TOPORSQ9NS56 1045 aaPredicted RBP17.25■□□□□ 0.35
COPE-202ENST00000349893 TNFSF13BQ9Y275 285 aa17.25■□□□□ 0.35
COPE-202ENST00000349893 NUP210Q8TEM1 1887 aaPredicted RBP17.24■□□□□ 0.35
COPE-202ENST00000349893 AKAP13Q12802 2813 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 AXIN1O15169 862 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 AKAP3O75969 853 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 MYL4P12829 197 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 KCNE1P15382 129 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 HOXC13P31276 330 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 RPL9P32969 192 aaKnown RBP17.24■□□□□ 0.35
COPE-202ENST00000349893 KPNA1P52294 538 aaPredicted RBP17.24■□□□□ 0.35
COPE-202ENST00000349893 ARPP19P56211 112 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 SCRN1Q12765 414 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 STK3Q13188 491 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 CTXN3Q4LDR2 81 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 ZNF280DQ6N043 979 aa17.24■□□□□ 0.35
COPE-202ENST00000349893 CACNA2D4Q7Z3S7 1137 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms