RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 ADAMTS1Q9UHI8 967 aa14.39□□□□□ -0.11
UBA3-201ENST00000349511 CPSF3Q9UKF6 684 aaKnown RBP14.39□□□□□ -0.11
UBA3-201ENST00000349511 GOLGA8KD6RF30 607 aa14.39□□□□□ -0.11
UBA3-201ENST00000349511 F8VZ95 297 aa14.39□□□□□ -0.11
UBA3-201ENST00000349511 FKTNO75072 461 aa14.39□□□□□ -0.11
UBA3-201ENST00000349511 C4BPAP04003 597 aaKnown RBP14.39□□□□□ -0.11
UBA3-201ENST00000349511 CXCL8P10145 99 aa14.39□□□□□ -0.11
UBA3-201ENST00000349511 NAB2Q15742 525 aa14.39□□□□□ -0.11
UBA3-201ENST00000349511 GDF6Q6KF10 455 aaPredicted RBP14.39□□□□□ -0.11
UBA3-201ENST00000349511 EMBQ6PCB8 327 aa14.39□□□□□ -0.11
UBA3-201ENST00000349511 CAVIN3Q969G5 261 aa14.39□□□□□ -0.11
UBA3-201ENST00000349511 STK33Q9BYT3 514 aa14.39□□□□□ -0.11
UBA3-201ENST00000349511 MYH10P35580 1976 aa14.39□□□□□ -0.11
UBA3-201ENST00000349511 EVI5O60447 810 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 STAT1P42224 750 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 FAM187BQ17R55 369 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 GLE1Q53GS7 698 aaKnown RBP14.38□□□□□ -0.11
UBA3-201ENST00000349511 CATSPER4Q7RTX7 472 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 ZNF571Q7Z3V5 609 aaPredicted RBP14.38□□□□□ -0.11
UBA3-201ENST00000349511 ZNF410Q86VK4 478 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 IFNLR1Q8IU57 520 aaPredicted RBP14.38□□□□□ -0.11
UBA3-201ENST00000349511 BRSK2Q8IWQ3 736 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 WNT8BQ93098 351 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 GCOM2Q9BZD3 368 aaPredicted RBP14.38□□□□□ -0.11
UBA3-201ENST00000349511 MTMR12Q9C0I1 747 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 UPF3AQ9H1J1 476 aaKnown RBP14.38□□□□□ -0.11
UBA3-201ENST00000349511 ACP6Q9NPH0 428 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 LUC7LQ9NQ29 371 aaKnown RBP14.38□□□□□ -0.11
UBA3-201ENST00000349511 RNF19AQ9NV58 838 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 RNF14Q9UBS8 474 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 FBXL5Q9UKA1 691 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 A0A087X0T9 212 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 OPA1O60313 960 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 VNN1O95497 513 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 FTCDO95954 541 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 CST3P01034 146 aaPredicted RBP14.38□□□□□ -0.11
UBA3-201ENST00000349511 INHAP05111 366 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 FAM228BP0C875 321 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 SOX5P35711 763 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 PIK3CAP42336 1068 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 TFAMQ00059 246 aaKnown RBP14.38□□□□□ -0.11
UBA3-201ENST00000349511 SLC18A3Q16572 532 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 ZACNQ401N2 412 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 SH3TC2Q8TF17 1288 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 DHX38Q92620 1227 aaKnown RBP14.38□□□□□ -0.11
UBA3-201ENST00000349511 KREMEN1Q96MU8 473 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 CGRRF1Q99675 332 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 COQ4Q9Y3A0 265 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 TRIM17Q9Y577 477 aa14.38□□□□□ -0.11
UBA3-201ENST00000349511 SCN10AQ9Y5Y9 1956 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 HLA-DRAP01903 254 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 CTSHP09668 335 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 STAG3L1P0CL83 205 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 GNAT1P11488 350 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 GTF2H1P32780 548 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 DNA2P51530 1060 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 MCCD1P59942 119 aaPredicted RBP14.37□□□□□ -0.11
UBA3-201ENST00000349511 CLDN10P78369 228 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 ALS2CLQ60I27 953 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 C15orf39Q6ZRI6 1047 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 GDF3Q9NR23 364 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 DDX20Q9UHI6 824 aaKnown RBP14.37□□□□□ -0.11
UBA3-201ENST00000349511 GTF2IRD1Q9UHL9 959 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 HES2Q9Y543 173 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 PTCH2Q9Y6C5 1203 aa14.37□□□□□ -0.11
UBA3-201ENST00000349511 MEFVO15553 781 aaPredicted RBP14.36□□□□□ -0.11
UBA3-201ENST00000349511 HSF2BPO75031 334 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 GLI1P08151 1106 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 DARSP14868 501 aaKnown RBP14.36□□□□□ -0.11
UBA3-201ENST00000349511 EIF4BP23588 611 aaKnown RBP14.36□□□□□ -0.11
UBA3-201ENST00000349511 HOXA11P31270 313 aaPredicted RBP14.36□□□□□ -0.11
UBA3-201ENST00000349511 IRAK1P51617 712 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 MAP3K21Q5TCX8 1036 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 MEI1Q5TIA1 1274 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 IFT20Q8IY31 132 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 EFCAB13Q8IY85 973 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 KLHDC9Q8NEP7 349 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 HELQQ8TDG4 1101 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 NT5C1BQ96P26 610 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 PACSIN1Q9BY11 444 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 EIF2AQ9BY44 585 aaKnown RBP14.36□□□□□ -0.11
UBA3-201ENST00000349511 RPF1Q9H9Y2 349 aaKnown RBP14.36□□□□□ -0.11
UBA3-201ENST00000349511 GRIN2DO15399 1336 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 A0A1B0GUA9 196 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 PMM2O15305 246 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 KPNA6O60684 536 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 NPTXRO95502 500 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 CALCAP01258 141 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 CARSP49589 748 aaKnown RBP14.36□□□□□ -0.11
UBA3-201ENST00000349511 NNTQ13423 1086 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 SNX17Q15036 470 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 SKIDA1Q1XH10 827 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 TTMPQ5BVD1 217 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 ARL8AQ96BM9 186 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 CAPS2Q9BXY5 557 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 CXCL16Q9H2A7 254 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 EPB41L5Q9HCM4 733 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 PACSIN2Q9UNF0 486 aaPredicted RBP14.36□□□□□ -0.11
UBA3-201ENST00000349511 PCDHGC5Q9Y5F6 944 aa14.36□□□□□ -0.11
UBA3-201ENST00000349511 GRID2IPA4D2P6 1211 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms