RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 PLEKHG4BQ96PX9 1271 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 REEP2Q9BRK0 252 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 NUP85Q9BW27 656 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 CCDC134Q9H6E4 229 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 SUDS3Q9H7L9 328 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-201ENST00000349038 PPARGC1AQ9UBK2 798 aaKnown RBP16.06■□□□□ 0.16
PTBP1-201ENST00000349038 WNK3Q9BYP7 1800 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 GSC2O15499 205 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 CCDC22O60826 627 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 BAG3O95817 575 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 FGFR1P11362 822 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 HARSP12081 509 aaKnown RBP16.06■□□□□ 0.16
PTBP1-201ENST00000349038 ETS1P14921 441 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 PRKCIP41743 596 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 GRIK5Q16478 980 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 PARP6Q2NL67 630 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 LIN52Q52LA3 116 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 IZUMO3Q5VZ72 239 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 PAOXQ6QHF9 649 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 NCAPG2Q86XI2 1143 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 MIPOL1Q8TD10 442 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 SLC35C1Q96A29 364 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 ACSF2Q96CM8 615 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-201ENST00000349038 YIPF2Q9BWQ6 316 aa16.06■□□□□ 0.16
PTBP1-201ENST00000349038 TRPC5Q9UL62 973 aaPredicted RBP16.06■□□□□ 0.16
PTBP1-201ENST00000349038 CYP26A1O43174 497 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 ARFIP2P53365 341 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 EDRF1Q3B7T1 1238 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 ZBED8Q8IZ13 594 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 ZFAND2BQ8WV99 257 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 BICD1Q96G01 975 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 CEP95Q96GE4 821 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 KRT82Q9NSB4 513 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 NDE1Q9NXR1 346 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 ATXN10Q9UBB4 475 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 R3HDM2Q9Y2K5 976 aaKnown RBP16.05■□□□□ 0.16
PTBP1-201ENST00000349038 TTC36A6NLP5 189 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 RNASEH1O60930 286 aaKnown RBP16.05■□□□□ 0.16
PTBP1-201ENST00000349038 MED24O75448 989 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 ATP5HO75947 161 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 ATF7P17544 494 aaPredicted RBP16.05■□□□□ 0.16
PTBP1-201ENST00000349038 ANXA13P27216 316 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 GCLMP48507 274 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 GSTO1P78417 241 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 EPHA7Q15375 998 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 WASHC2DQ5SRD0 308 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 TTBK2Q6IQ55 1244 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 ALYREFQ86V81 257 aaKnown RBP16.05■□□□□ 0.16
PTBP1-201ENST00000349038 ST13P4Q8IZP2 240 aaPredicted RBP16.05■□□□□ 0.16
PTBP1-201ENST00000349038 ART4Q93070 314 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 ARHGEF38Q9NXL2 777 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 PKD2L1Q9P0L9 805 aa16.05■□□□□ 0.16
PTBP1-201ENST00000349038 HEMK1Q9Y5R4 338 aaPredicted RBP16.05■□□□□ 0.16
PTBP1-201ENST00000349038 A0A0A6YYK5 440 aaPredicted RBP16.04■□□□□ 0.16
PTBP1-201ENST00000349038 TISP43B9A030 160 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 TMEM253P0C7T8 217 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 EFTUD2Q15029 972 aaKnown RBP eCLIP16.04■□□□□ 0.165e-8■■■□□ 17.3
PTBP1-201ENST00000349038 MAPK6Q16659 721 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 MFSD4BQ5TF39 518 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 TRMT10CQ7L0Y3 403 aaKnown RBP16.04■□□□□ 0.16
PTBP1-201ENST00000349038 WDR66Q8TBY9 1149 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 ASCC2Q9H1I8 757 aaPredicted RBP16.04■□□□□ 0.16
PTBP1-201ENST00000349038 KIF13BQ9NQT8 1826 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 GAS8O95995 478 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 GSTA2P09210 222 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 SPDYCQ5MJ68 293 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 IYDQ6PHW0 289 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 KCTD1Q719H9 257 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 PTPRN2Q92932 1015 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 BTBD10Q9BSF8 475 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 ROPN1BQ9BZX4 212 aaPredicted RBP16.04■□□□□ 0.16
PTBP1-201ENST00000349038 ZWILCHQ9H900 591 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 ROPN1Q9HAT0 212 aaPredicted RBP16.04■□□□□ 0.16
PTBP1-201ENST00000349038 TAS2R1Q9NYW7 299 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 KDM3AQ9Y4C1 1321 aa16.04■□□□□ 0.16
PTBP1-201ENST00000349038 CCNG1P51959 295 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 ALDH18A1P54886 795 aaKnown RBP16.03■□□□□ 0.16
PTBP1-201ENST00000349038 C6orf163Q5TEZ5 329 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 ZNF564Q8TBZ8 553 aaPredicted RBP16.03■□□□□ 0.16
PTBP1-201ENST00000349038 ZNF75CPQ92670 426 aaPredicted RBP16.03■□□□□ 0.16
PTBP1-201ENST00000349038 CCDC127Q96BQ5 260 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 TSPYL2Q9H2G4 693 aaPredicted RBP16.03■□□□□ 0.16
PTBP1-201ENST00000349038 SYNCQ9H7C4 482 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 CALUO43852 315 aaPredicted RBP16.03■□□□□ 0.16
PTBP1-201ENST00000349038 CD58P19256 250 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 CLK2P49760 499 aaKnown RBP16.03■□□□□ 0.16
PTBP1-201ENST00000349038 YARSP54577 528 aaKnown RBP16.03■□□□□ 0.16
PTBP1-201ENST00000349038 PPP2R5EQ16537 467 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 TRAPPC9Q96Q05 1148 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 RTFDC1Q9BY42 306 aaPredicted RBP16.03■□□□□ 0.16
PTBP1-201ENST00000349038 PDP2Q9P2J9 529 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 DOLKQ9UPQ8 538 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 ZNF148Q9UQR1 794 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.03■□□□□ 0.16
PTBP1-201ENST00000349038 FAM237BA0A1B0GVD1 139 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 GOLGA8IPA6NC78 632 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 GOLGA8JA6NMD2 632 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 CIB2O75838 187 aa16.03■□□□□ 0.16
PTBP1-201ENST00000349038 ABCD1P33897 745 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms