RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 KIF28PB7ZC32 967 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 GIMAP8Q8ND71 665 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 MCPH1Q8NEM0 835 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 CCDC124Q96CT7 223 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 FAM167AQ96KS9 214 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 PRDM5Q9NQX1 630 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 NOC2LQ9Y3T9 749 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 SPEF1Q9Y4P9 236 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 HUS1O60921 280 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 ADORA2BP29275 332 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 RIN2Q8WYP3 895 aaPredicted RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 FMO2Q99518 471 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 BLOC1S6Q9UL45 172 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 ARHGAP26Q9UNA1 814 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 CCDC22O60826 627 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 QARSP47897 775 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 SEC24CP53992 1094 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 TBC1D16Q8TBP0 767 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 PSPC1Q8WXF1 523 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 C11orf70Q9BRQ4 267 aa11.66□□□□□ -0.54
SMARCE1-202ENST00000348513 M0QYV0 167 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 FOXN1O15353 648 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 IDH3BO43837 385 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 CLPTM1O96005 669 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 PPARGP37231 505 aaPredicted RBP11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 KCNH2Q12809 1159 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 PLEKHA7Q6IQ23 1121 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 AFG1LQ8WV93 481 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 CCDC134Q9H6E4 229 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 ACAD9Q9H845 621 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 STX18Q9P2W9 335 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 A0A0G2JND7 137 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 FAM25AB3EWG3 89 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 FAM25CB3EWG5 89 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 FAM25GB3EWG6 89 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 IFNA8P32881 189 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 PCNX4Q63HM2 1172 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 SCAIQ8N9R8 606 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 MAML1Q92585 1016 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 EIF2AK1Q9BQI3 630 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 PCSK1NQ9UHG2 260 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 STK36Q9NRP7 1315 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 CDH3P22223 829 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 ATG9AQ7Z3C6 839 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 CHCHD4Q8N4Q1 142 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 TOPORSQ9NS56 1045 aaPredicted RBP11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 P4HBP07237 508 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 FOSL2P15408 326 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 AKR1D1P51857 326 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 RFX8Q6ZV50 586 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 TRMT10CQ7L0Y3 403 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 LDHDQ86WU2 507 aa11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.65□□□□□ -0.54
SMARCE1-202ENST00000348513 ANO9A1A5B4 782 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 PIK3R2O00459 728 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 GNB5O14775 395 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 ATP6V1B1P15313 513 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 CHN1P15882 459 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 EIF4BP23588 611 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 S100A5P33763 92 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 TNFAIP2Q03169 654 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 RALGDSQ12967 914 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 BNIP1Q12981 228 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 HP1BP3Q5SSJ5 553 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 CENPUQ71F23 418 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 LINC00116Q8NCU8 138 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 PYROXD1Q8WU10 500 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 PAIP1Q9H074 479 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 FAM217BQ9NTX9 383 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 VDRP11473 427 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 VAMP7P51809 220 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 NSUN2Q08J23 767 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 NME3Q13232 169 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 HABP4Q5JVS0 413 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 PPP1R2P3Q6NXS1 205 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 TRIM67Q6ZTA4 783 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 DCLRE1BQ9H816 532 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 AASDHPPTQ9NRN7 309 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 TSR3Q9UJK0 312 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 CROTQ9UKG9 612 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 UBE4BO95155 1302 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 H0Y626 953 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 MATN2O00339 956 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 TRIM49P0CI25 452 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 TRIM49CP0CI26 452 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 KRT33BQ14525 404 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 KNOP1Q1ED39 458 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 SRBD1Q8N5C6 995 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 BEST2Q8NFU1 509 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 HPS3Q969F9 1004 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 FAM20AQ96MK3 541 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 DEPDC7Q96QD5 511 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 TRIM8Q9BZR9 551 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 ING2Q9H160 280 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 ZNF211Q13398 564 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 GALNT15Q8N3T1 639 aa11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 RNF25Q96BH1 459 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 DDX56Q9NY93 547 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-202ENST00000348513 SLC8A2Q9UPR5 921 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms