RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 TLR5O60602 858 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 TBX18O95935 607 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 PSAPP07602 524 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 SUPT20HL2P0C7V6 817 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 HOXD8P13378 290 aaPredicted RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 TXLNAP40222 546 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 CCT6AP40227 531 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 PSMC6P62333 389 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 NKX3-2P78367 333 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 PTK2Q05397 1052 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 PRKG2Q13237 762 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 KARSQ15046 597 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 SMAD1Q15797 465 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 GNASQ5JWF2 1037 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 HAUS3Q68CZ6 603 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 RETSATQ6NUM9 610 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 CXCL17Q6UXB2 119 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 FGD2Q7Z6J4 655 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 SYNPOQ8N3V7 929 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 PPTC7Q8NI37 304 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 LRRC15Q8TF66 581 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 CALML4Q96GE6 196 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 RADILQ96JH8 1075 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 PCYT2Q99447 389 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 NUDT16L1Q9BRJ7 211 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 UPF3AQ9H1J1 476 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 C11orf49Q9H6J7 331 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 WRAP73Q9P2S5 460 aaPredicted RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 CCDC39Q9UFE4 941 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 KDM3AQ9Y4C1 1321 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 A0A1W2PQ45 241 aaPredicted RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 A0A1W2PQY0 241 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 POTEB3A0JP26 581 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 FAM86C2PA6NEL3 165 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 DNM1LO00429 736 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 MSCO60682 206 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 FBXO21O94952 628 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 MBD3O95983 291 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 ASGR1P07306 291 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 MMP3P08254 477 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 ABCB4P21439 1286 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 TCF7P36402 384 aaPredicted RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 SSR1P43307 286 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 SYKP43405 635 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 QARSP47897 775 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 SP4Q02446 784 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 TBX2Q13207 712 aaPredicted RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 CTTNQ14247 550 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 SLMAPQ14BN4 828 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 RRAGBQ5VZM2 374 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 POTEBQ6S5H4 581 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 CATSPER4Q7RTX7 472 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 SPATS2Q86XZ4 545 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 NRSN1Q8IZ57 195 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 CPA6Q8N4T0 437 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 AFAP1L1Q8TED9 768 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 AFG1LQ8WV93 481 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 KHSRPQ92945 711 aaKnown RBP eCLIP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 UBXN10Q96LJ8 280 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 PYM1Q9BRP8 204 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 GPATCH1Q9BRR8 931 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 ARHGAP9Q9BRR9 750 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 NOC4LQ9BVI4 516 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 PANK2Q9BZ23 570 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 SLC13A1Q9BZW2 595 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 NT5C3AQ9H0P0 336 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 COMMD8Q9NX08 183 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 TRMT1Q9NXH9 659 aaKnown RBP5.61□□□□□ -1.51
VCAM1-202ENST00000347652 PDP2Q9P2J9 529 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 SAMM50Q9Y512 469 aa5.61□□□□□ -1.51
VCAM1-202ENST00000347652 GRIN2DO15399 1336 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 A0A1B0GVC2 190 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 NOP56O00567 594 aaKnown RBP5.6□□□□□ -1.51
VCAM1-202ENST00000347652 BRINP1O60477 761 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 ZNF202O95125 648 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 STBD1O95210 358 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 LYPLA2O95372 231 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 POLBP06746 335 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 SYN1P17600 705 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 RHCEP18577 417 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 PLCG1P19174 1290 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 ATP4AP20648 1035 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 CTNNA1P35221 906 aaKnown RBP5.6□□□□□ -1.51
VCAM1-202ENST00000347652 ACLYP53396 1101 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 PSMC5P62195 406 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 RHDQ02161 417 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 CYP4A11Q02928 519 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 GRM2Q14416 872 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 HSP90AA2PQ14568 343 aaPredicted RBP5.6□□□□□ -1.51
VCAM1-202ENST00000347652 SLC14A2Q15849 920 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 FSCN1Q16658 493 aaKnown RBP5.6□□□□□ -1.51
VCAM1-202ENST00000347652 UGCGQ16739 394 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 RNF219Q5W0B1 726 aaPredicted RBP5.6□□□□□ -1.51
VCAM1-202ENST00000347652 FAAH2Q6GMR7 532 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 DESI1Q6ICB0 168 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 CCDC73Q6ZRK6 1079 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 PLPPR4Q7Z2D5 763 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 GALNT13Q8IUC8 556 aa5.6□□□□□ -1.51
VCAM1-202ENST00000347652 CCDC60Q8IWA6 550 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms