RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 MLH1P40692 756 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 SERPINB8P50452 374 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 FAM49AQ9H0Q0 323 aaPredicted RBP16.31■□□□□ 0.2
SRPK1-201ENST00000346162 AP5M1Q9H0R1 490 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 ZBED1O96006 694 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 PLEKP08567 350 aaPredicted RBP16.31■□□□□ 0.2
SRPK1-201ENST00000346162 CCDC159P0C7I6 412 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 GCLCP48506 637 aaPredicted RBP16.31■□□□□ 0.2
SRPK1-201ENST00000346162 TRPC1P48995 793 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 RPS6KA2Q15349 733 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 DNAJC7Q99615 494 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 CELF4Q9BZC1 486 aaKnown RBP16.31■□□□□ 0.2
SRPK1-201ENST00000346162 JPH1Q9HDC5 661 aaPredicted RBP16.31■□□□□ 0.2
SRPK1-201ENST00000346162 GPC4O75487 556 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 PRLRP16471 622 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 GARSP41250 739 aaKnown RBP16.31■□□□□ 0.2
SRPK1-201ENST00000346162 DNAJC3Q13217 504 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 LMBRD2Q68DH5 695 aaPredicted RBP16.31■□□□□ 0.2
SRPK1-201ENST00000346162 SLC35G2Q8TBE7 412 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 CCT7Q99832 543 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 FAM96AQ9H5X1 160 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 DMAP1Q9NPF5 467 aaPredicted RBP16.31■□□□□ 0.2
SRPK1-201ENST00000346162 GID8Q9NWU2 228 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 SUCLA2Q9P2R7 463 aaPredicted RBP16.31■□□□□ 0.2
SRPK1-201ENST00000346162 CAPN6Q9Y6Q1 641 aa16.31■□□□□ 0.2
SRPK1-201ENST00000346162 KLHL33A6NCF5 533 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 SARSP49591 514 aaKnown RBP16.3■□□□□ 0.2
SRPK1-201ENST00000346162 GABPAQ06546 454 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 TRIM16LQ309B1 348 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 SLC4A9Q96Q91 983 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 RIT2Q99578 217 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 TIPINQ9BVW5 301 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 ALG13Q9NP73 1137 aaKnown RBP16.3■□□□□ 0.2
SRPK1-201ENST00000346162 TMA7Q9Y2S6 64 aaKnown RBP16.3■□□□□ 0.2
SRPK1-201ENST00000346162 O00370 1275 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 RTN2O75298 545 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 DAB1O75553 588 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 KRT8P05787 483 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 EN1Q05925 392 aaPredicted RBP16.3■□□□□ 0.2
SRPK1-201ENST00000346162 APOBEC3FQ8IUX4 373 aaKnown RBP16.3■□□□□ 0.2
SRPK1-201ENST00000346162 HSPH1Q92598 858 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 RXFP1Q9HBX9 757 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 IL17RBQ9NRM6 502 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 STRNO43815 780 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 LGR5O75473 907 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 DGAT1O75907 488 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 ABL1P00519 1130 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 IZUMO2Q6UXV1 221 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 CATSPER4Q7RTX7 472 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 SLC10A4Q96EP9 437 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 ZNF668Q96K58 619 aaPredicted RBP16.3■□□□□ 0.2
SRPK1-201ENST00000346162 MKNK1Q9BUB5 465 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 TRPV6Q9H1D0 765 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 RICTORQ6R327 1708 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 FAM47DPA6NHR8 397 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 RTN3O95197 1032 aaPredicted RBP16.3■□□□□ 0.2
SRPK1-201ENST00000346162 GGPS1O95749 300 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 CLPTM1O96005 669 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 MDH1BQ5I0G3 518 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 KLHDC7AQ5VTJ3 777 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 RHOT1Q8IXI2 618 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 KCTD17Q8N5Z5 321 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 TRAPPC9Q96Q05 1148 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 GINM1Q9NU53 330 aa16.3■□□□□ 0.2
SRPK1-201ENST00000346162 TTC7AQ9ULT0 858 aaPredicted RBP16.3■□□□□ 0.2
SRPK1-201ENST00000346162 ZSCAN5CA6NGD5 496 aaPredicted RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 RSPH10B2B2RC85 870 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 XPO1O14980 1071 aaKnown RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 RSPH10BP0C881 870 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 INAQ16352 499 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 KYNUQ16719 465 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 CENPPQ6IPU0 288 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 DNAAF3Q8N9W5 541 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 OR6B3Q8NGW1 331 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 MAGEC3Q8TD91 643 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 ANKS1AQ92625 1134 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 SCYL1Q96KG9 808 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 RNPEPL1Q9HAU8 725 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 ATXN10Q9UBB4 475 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 STRIP2Q9ULQ0 834 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 COPEO14579 308 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 MSH4O15457 936 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 FAM153BP0C7A2 387 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 MAP4P27816 1152 aaKnown RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 KCNJ2P63252 427 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 COG2Q14746 738 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 FAM153CQ494X1 144 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 DNAL1Q4LDG9 190 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 TRIM72Q6ZMU5 477 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 RHPN2Q8IUC4 686 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 TTC13Q8NBP0 860 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 SYN2Q92777 582 aaPredicted RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 TRABDQ9H4I3 376 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 FAM153AQ9UHL3 310 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 EIF3DO15371 548 aaKnown RBP eCLIP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 NR3C2P08235 984 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 ITKQ08881 620 aa16.29■□□□□ 0.2
SRPK1-201ENST00000346162 TBL3Q12788 808 aaKnown RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 PPP6R3Q5H9R7 873 aaPredicted RBP16.29■□□□□ 0.2
SRPK1-201ENST00000346162 NT5DC1Q5TFE4 455 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms