RNA–Protein interactions for RNA: ENST00000346141.10

TUBD1-203, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-203ENST00000346141 RSPO2Q6UXX9 243 aaPredicted RBP12.96□□□□□ -0.34
TUBD1-203ENST00000346141 GRASPQ7Z6J2 395 aaPredicted RBP12.96□□□□□ -0.34
TUBD1-203ENST00000346141 MAP4K3Q8IVH8 894 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 APPL2Q8NEU8 664 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 ZNF461Q8TAF7 563 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 SUSD3Q96L08 255 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 HAPLN2Q9GZV7 340 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 MFSD1Q9H3U5 465 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 ST6GALNAC4Q9H4F1 302 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 ZSCAN16Q9H4T2 348 aaPredicted RBP12.96□□□□□ -0.34
TUBD1-203ENST00000346141 TUBGCP4Q9UGJ1 667 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 UBQLN1Q9UMX0 589 aaKnown RBP12.96□□□□□ -0.34
TUBD1-203ENST00000346141 KMT2EQ8IZD2 1858 aa12.96□□□□□ -0.34
TUBD1-203ENST00000346141 DOCK8Q8NF50 2099 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 A0A0B4J269 797 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 OGTO15294 1046 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 CCL16O15467 120 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 XPOTO43592 962 aaKnown RBP12.95□□□□□ -0.34
TUBD1-203ENST00000346141 LRPAP1P30533 357 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 MCM4P33991 863 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 GTF2BQ00403 316 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 ROR1Q01973 937 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 SPECC1Q5M775 1068 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 USP49Q70CQ1 688 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 CD302Q8IX05 232 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 FIZ1Q96SL8 496 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 MSTO1Q9BUK6 570 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 IRF2BPLQ9H1B7 796 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 RPF1Q9H9Y2 349 aaKnown RBP12.95□□□□□ -0.34
TUBD1-203ENST00000346141 FBXL21Q9UKT6 434 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 POLIQ9UNA4 740 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 MTMR6Q9Y217 621 aa12.95□□□□□ -0.34
TUBD1-203ENST00000346141 ANHXE9PGG2 379 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 STX6O43752 255 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 FAM189A1O60320 539 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 TBC1D4O60343 1298 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 ABLIM3O94929 683 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 ADRB2P07550 413 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 TNFSF9P41273 254 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 CLCN5P51795 746 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 CEBPZQ03701 1054 aaKnown RBP12.94□□□□□ -0.34
TUBD1-203ENST00000346141 TCF15Q12870 199 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 MRPL58Q14197 206 aaKnown RBP12.94□□□□□ -0.34
TUBD1-203ENST00000346141 SLC39A14Q15043 492 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 ZBTB6Q15916 424 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 ENOX2Q16206 610 aaKnown RBP12.94□□□□□ -0.34
TUBD1-203ENST00000346141 CTXN3Q4LDR2 81 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 RRAGBQ5VZM2 374 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 TPGS2Q68CL5 300 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 ZNF280DQ6N043 979 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 FAM173BQ6P4H8 233 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 SLC44A3Q8N4M1 653 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 RSAD2Q8WXG1 361 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 SEL1LQ9UBV2 794 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 WNT16Q9UBV4 365 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 FBXL5Q9UKA1 691 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 CDH7Q9ULB5 785 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 KCNH3Q9ULD8 1083 aa12.94□□□□□ -0.34
TUBD1-203ENST00000346141 ARHGEF37A1IGU5 675 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 WDR27A2RRH5 827 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 LACTBL1A8MY62 500 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 SRFP11831 508 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 ATF2P15336 505 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 NMT1P30419 496 aaKnown RBP12.93□□□□□ -0.34
TUBD1-203ENST00000346141 ELF1P32519 619 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 SPAG1Q07617 926 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 HTR4Q13639 388 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 PABPC1LQ4VXU2 614 aaKnown RBP12.93□□□□□ -0.34
TUBD1-203ENST00000346141 SLFN12LQ6IEE8 588 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 CCDC73Q6ZRK6 1079 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 SV2BQ7L1I2 683 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 DDX12PQ92771 950 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 HVCN1Q96D96 273 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 CLIC6Q96NY7 704 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 USP28Q96RU2 1077 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 OXCT2Q9BYC2 517 aaPredicted RBP12.93□□□□□ -0.34
TUBD1-203ENST00000346141 CPSF3Q9UKF6 684 aaKnown RBP12.93□□□□□ -0.34
TUBD1-203ENST00000346141 MAFFQ9ULX9 164 aa12.93□□□□□ -0.34
TUBD1-203ENST00000346141 PDCD11Q14690 1871 aaKnown RBP12.93□□□□□ -0.34
TUBD1-203ENST00000346141 M0QZQ0 153 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 PRRG1O14668 218 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 NARSO43776 548 aaKnown RBP12.92□□□□□ -0.34
TUBD1-203ENST00000346141 LRG1P02750 347 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 GAP43P17677 238 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 PAX3P23760 479 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 NASPP49321 788 aaPredicted RBP12.92□□□□□ -0.34
TUBD1-203ENST00000346141 AARSP49588 968 aaKnown RBP eCLIP12.92□□□□□ -0.34
TUBD1-203ENST00000346141 ARPP19P56211 112 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 NTHL1P78549 312 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 ZC2HC1CQ53FD0 456 aaPredicted RBP12.92□□□□□ -0.34
TUBD1-203ENST00000346141 ZBTB41Q5SVQ8 909 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 SLC39A4Q6P5W5 647 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 MTSS1LQ765P7 747 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 DYMQ7RTS9 669 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 ZNF720Q7Z2F6 126 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 ALYREFQ86V81 257 aaKnown RBP12.92□□□□□ -0.34
TUBD1-203ENST00000346141 SFR1Q86XK3 245 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 TCEAL8Q8IYN2 117 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 SIX5Q8N196 739 aa12.92□□□□□ -0.34
TUBD1-203ENST00000346141 TMEM105Q8N8V8 129 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms