RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 HUNKP57058 714 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 C12orf29Q8N999 325 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 ELAC2Q9BQ52 826 aaKnown RBP14.13□□□□□ -0.15
CASC4-202ENST00000345795 LPIN3Q9BQK8 851 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 FNDC3AQ9Y2H6 1198 aaKnown RBP14.13□□□□□ -0.15
CASC4-202ENST00000345795 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.13□□□□□ -0.15
CASC4-202ENST00000345795 ANKRD36CQ5JPF3 1778 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 SYF2O95926 243 aaKnown RBP14.13□□□□□ -0.15
CASC4-202ENST00000345795 FKBP1AP62942 108 aaKnown RBP14.13□□□□□ -0.15
CASC4-202ENST00000345795 SEMA3FQ13275 785 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 ACOT1Q86TX2 421 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 KIAA0319LQ8IZA0 1049 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 MMGT1Q8N4V1 131 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 TMEM121Q9BTD3 319 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 CISHQ9NSE2 258 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 RAB21Q9UL25 225 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 MYH15Q9Y2K3 1946 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 MYO7AQ13402 2215 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 EIF4E1BA6NMX2 242 aaKnown RBP14.13□□□□□ -0.15
CASC4-202ENST00000345795 GOLGA8KD6RF30 607 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 EXTL3O43909 919 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 ADORA2AP29274 412 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 FMO1Q01740 532 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 CDR2Q01850 454 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 TFDP1Q14186 410 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 C4orf33Q8N1A6 199 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 OR6J1Q8NGC5 347 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 ATXN7L3BQ96GX2 97 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 GINM1Q9NU53 330 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 CCDC88AQ3V6T2 1871 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 CEP290O15078 2479 aa14.13□□□□□ -0.15
CASC4-202ENST00000345795 CAND2O75155 1236 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 RARAP10276 462 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 IRAK1P51617 712 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 CDK17Q00537 523 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 SLFN12LQ6IEE8 588 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 ADARB2Q9NS39 739 aaKnown RBP14.12□□□□□ -0.15
CASC4-202ENST00000345795 HESX1Q9UBX0 185 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 CAPN9O14815 690 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 ACAT1P24752 427 aaKnown RBP14.12□□□□□ -0.15
CASC4-202ENST00000345795 STX2P32856 288 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 NME3Q13232 169 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 WDR93Q6P2C0 686 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 ZBED8Q8IZ13 594 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 TMEM35BQ8NCS4 154 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 INPP4AQ96PE3 977 aaPredicted RBP14.12□□□□□ -0.15
CASC4-202ENST00000345795 ZSWIM1Q9BR11 485 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 PCDHB2Q9Y5E7 798 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 ATRNL1Q5VV63 1379 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 MYO1CO00159 1063 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 PDHXO00330 501 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 ARSEP51690 589 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 ALCAMQ13740 583 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 P3H1Q32P28 736 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 TTMPQ5BVD1 217 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 ERO1BQ86YB8 467 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 MAP4K3Q8IVH8 894 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 GPC2Q8N158 579 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 METTL5Q9NRN9 209 aaKnown RBP14.12□□□□□ -0.15
CASC4-202ENST00000345795 PCDHGC5Q9Y5F6 944 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 KNL1Q8NG31 2342 aa14.12□□□□□ -0.15
CASC4-202ENST00000345795 PTPRJQ12913 1337 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 SOWAHBA6NEL2 793 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 ATP8B1O43520 1251 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 KRT3P12035 628 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 TCF4P15884 667 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 CCNA1P78396 465 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 DARS2Q6PI48 645 aaKnown RBP14.11□□□□□ -0.15
CASC4-202ENST00000345795 PALM2Q8IXS6 379 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 ARFGAP2Q8N6H7 521 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 ZNF606Q8WXB4 792 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 SYN2Q92777 582 aaPredicted RBP14.11□□□□□ -0.15
CASC4-202ENST00000345795 GOLGA2P5Q9HBQ8 144 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 SYNGAP1Q96PV0 1343 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 NFICP08651 508 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 BPIFB4P59827 614 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 IFI35P80217 286 aaPredicted RBP14.11□□□□□ -0.15
CASC4-202ENST00000345795 ASTE1Q2TB18 679 aaPredicted RBP14.11□□□□□ -0.15
CASC4-202ENST00000345795 ARMCX2Q7L311 632 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 CFAP36Q96G28 342 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 SNCAIPQ9Y6H5 919 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 A8MXQ7 604 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 CREB3O43889 395 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 MAPTP10636 758 aaKnown RBP14.11□□□□□ -0.15
CASC4-202ENST00000345795 HNRNPH3P31942 346 aaKnown RBP14.11□□□□□ -0.15
CASC4-202ENST00000345795 CDH6P55285 790 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 GTF2BQ00403 316 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 WHAMMQ8TF30 809 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 CCDC77Q9BR77 488 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 ERP44Q9BS26 406 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 OSBPL8Q9BZF1 889 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 IQCGQ9H095 443 aaKnown RBP14.11□□□□□ -0.15
CASC4-202ENST00000345795 RASSF4Q9H2L5 321 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 SMYD3Q9H7B4 428 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 FAM114A2Q9NRY5 505 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 NKIRAS1Q9NYS0 192 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 KCND2Q9NZV8 630 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 PCDH10Q9P2E7 1040 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 NR2E3Q9Y5X4 410 aa14.11□□□□□ -0.15
CASC4-202ENST00000345795 PAPPAQ13219 1627 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms