RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 NLRP4Q96MN2 994 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 ARHGAP20Q9P2F6 1191 aa18.34■□□□□ 0.53
SPAST-202ENST00000345662 MYO3BQ8WXR4 1341 aa18.33■□□□□ 0.53
SPAST-202ENST00000345662 MYBP10242 640 aa18.33■□□□□ 0.53
SPAST-202ENST00000345662 NSUN2Q08J23 767 aaKnown RBP eCLIP18.33■□□□□ 0.53
SPAST-202ENST00000345662 SWT1Q5T5J6 900 aaKnown RBP18.33■□□□□ 0.53
SPAST-202ENST00000345662 METTL23Q86XA0 190 aa18.33■□□□□ 0.53
SPAST-202ENST00000345662 PSPC1Q8WXF1 523 aaKnown RBP18.33■□□□□ 0.53
SPAST-202ENST00000345662 MAGEB5Q9BZ81 275 aa18.33■□□□□ 0.53
SPAST-202ENST00000345662 WHRNQ9P202 907 aa18.33■□□□□ 0.53
SPAST-202ENST00000345662 CSADQ9Y600 493 aa18.33■□□□□ 0.53
SPAST-202ENST00000345662 GPC3P51654 580 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 HSPA2P54652 639 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 MAPK6Q16659 721 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 ANGPTL8Q6UXH0 198 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 OPTNQ96CV9 577 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 NMD3Q96D46 503 aaKnown RBP18.33■□□□□ 0.52
SPAST-202ENST00000345662 AP4S1Q9Y587 144 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 CNTNAP5Q8WYK1 1306 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 M0R3G1 203 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 ATMINO43313 823 aaPredicted RBP18.33■□□□□ 0.52
SPAST-202ENST00000345662 CLPTM1O96005 669 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 S100A5P33763 92 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 SYCP2LQ5T4T6 812 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 FRA10AC1Q70Z53 315 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 NDUFAF2Q8N183 169 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 PRPF18Q99633 342 aaKnown RBP18.33■□□□□ 0.52
SPAST-202ENST00000345662 THAP2Q9H0W7 228 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 CDC42EP4Q9H3Q1 356 aaKnown RBP18.33■□□□□ 0.52
SPAST-202ENST00000345662 RBAKQ9NYW8 714 aaPredicted RBP18.33■□□□□ 0.52
SPAST-202ENST00000345662 AK9Q5TCS8 1911 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 KRT16P08779 473 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 TCN1P20061 433 aaPredicted RBP18.33■□□□□ 0.52
SPAST-202ENST00000345662 SFNP31947 248 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 SSTR3P32745 418 aaPredicted RBP18.33■□□□□ 0.52
SPAST-202ENST00000345662 GRAPQ13588 217 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 FAM47CQ5HY64 1035 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 GRAPLQ8TC17 118 aaPredicted RBP18.33■□□□□ 0.52
SPAST-202ENST00000345662 HDAC7Q8WUI4 952 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 MAML3Q96JK9 1138 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 EHD4Q9H223 541 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 RGL1Q9NZL6 768 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 SLAIN2Q9P270 581 aa18.33■□□□□ 0.52
SPAST-202ENST00000345662 PIGHQ14442 188 aaPredicted RBP18.32■□□□□ 0.52
SPAST-202ENST00000345662 TTC33Q6PID6 262 aaPredicted RBP18.32■□□□□ 0.52
SPAST-202ENST00000345662 PRUNE1Q86TP1 453 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 MTDHQ86UE4 582 aaKnown RBP18.32■□□□□ 0.52
SPAST-202ENST00000345662 FAM111AQ96PZ2 611 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 CNOT7Q9UIV1 285 aaKnown RBP18.32■□□□□ 0.52
SPAST-202ENST00000345662 TRAPPC3O43617 180 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 SRP72O76094 671 aaKnown RBP18.32■□□□□ 0.52
SPAST-202ENST00000345662 ELF3P78545 371 aaPredicted RBP18.32■□□□□ 0.52
SPAST-202ENST00000345662 ZNF844Q08AG5 666 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 C12orf60Q5U649 245 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 RNF135Q8IUD6 432 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 PPIL6Q8IXY8 311 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 TMCO5AQ8N6Q1 288 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 PCYOX1LQ8NBM8 494 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 ZNF512BQ96KM6 892 aaPredicted RBP18.32■□□□□ 0.52
SPAST-202ENST00000345662 FAM8A1Q9UBU6 413 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 FKBP6O75344 327 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 GH2P01242 217 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 PPARGP37231 505 aaPredicted RBP18.32■□□□□ 0.52
SPAST-202ENST00000345662 AP3M2P53677 418 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 ABCE1P61221 599 aaKnown RBP18.32■□□□□ 0.52
SPAST-202ENST00000345662 WLSQ5T9L3 541 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 CLEC4FQ8N1N0 589 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 LZICQ8WZA0 190 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 PACSIN1Q9BY11 444 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 GPR141Q7Z602 305 aa18.32■□□□□ 0.52
SPAST-202ENST00000345662 ATXN2LQ8WWM7 1075 aaKnown RBP18.32■□□□□ 0.52
SPAST-202ENST00000345662 TARBP1Q13395 1621 aaKnown RBP18.31■□□□□ 0.52
SPAST-202ENST00000345662 PSMC5P62195 406 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 FOXD4Q12950 439 aaPredicted RBP18.31■□□□□ 0.52
SPAST-202ENST00000345662 PID1Q7Z2X4 250 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 CLMNQ96JQ2 1002 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 ETAA1Q9NY74 926 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 RALAP11233 206 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 FXR2P51116 673 aaKnown RBP eCLIP18.31■□□□□ 0.52
SPAST-202ENST00000345662 MAP3K10Q02779 954 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 R3HDM1Q15032 1099 aaKnown RBP18.31■□□□□ 0.52
SPAST-202ENST00000345662 SNX30Q5VWJ9 437 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 RNF139Q8WU17 664 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 RMDN2Q96LZ7 410 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 EPB41L4AQ9HCS5 686 aaPredicted RBP18.31■□□□□ 0.52
SPAST-202ENST00000345662 GTF3C4Q9UKN8 822 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 AGO2Q9UKV8 859 aaKnown RBP18.31■□□□□ 0.52
SPAST-202ENST00000345662 STAP1Q9ULZ2 295 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 CDYLQ9Y232 598 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 QRICH2Q9H0J4 1663 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 TBC1D4O60343 1298 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 POLD1P28340 1107 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 DEFA1P59665 94 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 DEFA3P59666 94 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 TRIM28Q13263 835 aaKnown RBP18.31■□□□□ 0.52
SPAST-202ENST00000345662 KCTD2Q14681 263 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 KLHL4Q9C0H6 718 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 CROCC2H7BZ55 1655 aa18.31■□□□□ 0.52
SPAST-202ENST00000345662 GTPBP10A4D1E9 387 aaKnown RBP18.31■□□□□ 0.52
SPAST-202ENST00000345662 ZNF189O75820 626 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms