RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 ZBTB9Q96C00 473 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 INTS2Q9H0H0 1204 aaKnown RBP7.89□□□□□ -1.15
GDNF-202ENST00000344622 DPEP3Q9H4B8 488 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 PRDM5Q9NQX1 630 aaPredicted RBP7.89□□□□□ -1.15
GDNF-202ENST00000344622 NOD1Q9Y239 953 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 FRMD4BQ9Y2L6 1034 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 CASTOR2A6NHX0 329 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 GRXCR1A8MXD5 290 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 PITPNM1O00562 1244 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 HLA-DRAP01903 254 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 MCF2P10911 925 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 GNAT1P11488 350 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 TNNI1P19237 187 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 PAK2Q13177 524 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 INTS8Q75QN2 995 aaKnown RBP7.89□□□□□ -1.15
GDNF-202ENST00000344622 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.89□□□□□ -1.15
GDNF-202ENST00000344622 ECHDC2Q86YB7 292 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 C12orf29Q8N999 325 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 KBTBD7Q8WVZ9 684 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 DDX1Q92499 740 aaKnown RBP7.89□□□□□ -1.15
GDNF-202ENST00000344622 TOX2Q96NM4 488 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 DNAJC7Q99615 494 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 TSG101Q99816 390 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 PACSIN1Q9BY11 444 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 TSPYL2Q9H2G4 693 aaPredicted RBP7.89□□□□□ -1.15
GDNF-202ENST00000344622 RAB20Q9NX57 234 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 CYTH4Q9UIA0 394 aa7.89□□□□□ -1.15
GDNF-202ENST00000344622 TIMM13Q9Y5L4 95 aaPredicted RBP7.89□□□□□ -1.15
GDNF-202ENST00000344622 GOLGA6L6A8MZA4 724 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 F8VZ95 297 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 GABBR2O75899 941 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 FAM189BP81408 668 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 PTPN11Q06124 597 aaPredicted RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 ZNF394Q53GI3 561 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 SCARA5Q6ZMJ2 495 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 ZNF571Q7Z3V5 609 aaPredicted RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 CPNE8Q86YQ8 564 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 STKLD1Q8NE28 680 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 ABHD8Q96I13 439 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 CASD1Q96PB1 797 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 TMEM209Q96SK2 561 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 CGRRF1Q99675 332 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 RTP3Q9BQQ7 232 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 JPH2Q9BR39 696 aaPredicted RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 LZTFL1Q9NQ48 299 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 SPTLC3Q9NUV7 552 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 ZMYND8Q9ULU4 1186 aaPredicted RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 CAPN11Q9UMQ6 739 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 A0A1W2PQC6 194 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 ANO9A1A5B4 782 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 MAPK13O15264 365 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 CHRNB2P17787 502 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 POLR2BP30876 1174 aaKnown RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 KRT9P35527 623 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 CACNA2D1P54289 1103 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 CYP27A1Q02318 531 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 MYBPC2Q14324 1141 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 EXOC3L4Q17RC7 722 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 FAM117BQ6P1L5 589 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 RSPO2Q6UXX9 243 aaPredicted RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 MRPL10Q7Z7H8 261 aaKnown RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 TFAP2BQ92481 460 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 KHSRPQ92945 711 aaKnown RBP eCLIP7.88□□□□□ -1.15
GDNF-202ENST00000344622 PCDHB18PQ96TA0 734 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 TMEM8AQ9HCN3 771 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 ITIH6Q6UXX5 1313 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 TULP2O00295 520 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 ATP2C2O75185 946 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 ASS1P00966 412 aaKnown RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 TIMP1P01033 207 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 TRIM21P19474 475 aaKnown RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 MXI1P50539 228 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 MYL7Q01449 175 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 PTK2Q05397 1052 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 ARHGEF6Q15052 776 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 PTPROQ16827 1216 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 ARHGAP44Q17R89 818 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 LRRN4CLQ8ND94 238 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 EHBP1Q8NDI1 1231 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 LNX1Q8TBB1 728 aaPredicted RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 CCDC47Q96A33 483 aaKnown RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 MRPL45Q9BRJ2 306 aaKnown RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 RHOBTB2Q9BYZ6 727 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 TMEM39AQ9NV64 488 aa7.88□□□□□ -1.15
GDNF-202ENST00000344622 MAGEC2Q9UBF1 373 aaPredicted RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.88□□□□□ -1.15
GDNF-202ENST00000344622 V9GYY5 206 aaPredicted RBP7.88□□□□□ -1.15
GDNF-202ENST00000344622 PIRO00625 290 aa7.87□□□□□ -1.15
GDNF-202ENST00000344622 NRG2O14511 850 aaPredicted RBP7.87□□□□□ -1.15
GDNF-202ENST00000344622 UPP2O95045 317 aa7.87□□□□□ -1.15
GDNF-202ENST00000344622 FECHP22830 423 aa7.87□□□□□ -1.15
GDNF-202ENST00000344622 UPP1Q16831 310 aa7.87□□□□□ -1.15
GDNF-202ENST00000344622 SOWAHAQ2M3V2 549 aa7.87□□□□□ -1.15
GDNF-202ENST00000344622 TMC2Q8TDI7 906 aa7.87□□□□□ -1.15
GDNF-202ENST00000344622 ACAP3Q96P50 834 aa7.87□□□□□ -1.15
GDNF-202ENST00000344622 BAG1Q99933 345 aaPredicted RBP7.87□□□□□ -1.15
GDNF-202ENST00000344622 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.87□□□□□ -1.15
GDNF-202ENST00000344622 TRAIPQ9BWF2 469 aa7.87□□□□□ -1.15
GDNF-202ENST00000344622 UBE2TQ9NPD8 197 aaPredicted RBP7.87□□□□□ -1.15
GDNF-202ENST00000344622 APEX2Q9UBZ4 518 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms