RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 MTG1Q9BT17 334 aaPredicted RBP20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 MTMR12Q9C0I1 747 aa20.67■□□□□ 0.9
SEMA6C-201ENST00000341697 MAPTP10636 758 aaKnown RBP20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 RBBP5Q15291 538 aaKnown RBP20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 EFHC1Q5JVL4 640 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 RAD9BQ6WBX8 426 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 SPATA4Q8NEY3 305 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 TRPM4Q8TD43 1214 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 TTI1O43156 1089 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 FAM200BP0CF97 657 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 BRD2P25440 801 aaKnown RBP20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 CASP4P49662 377 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 MYBPC2Q14324 1141 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 GRIK4Q16099 956 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 ZC3H15Q8WU90 426 aaKnown RBP20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 CGRRF1Q99675 332 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 KLHL11Q9NVR0 708 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 SMIM22K7EJ46 135 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 PON1P27169 355 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 DEUP1Q05D60 604 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 REPS2Q8NFH8 660 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 SCG3Q8WXD2 468 aaKnown RBP20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 TAF1DQ9H5J8 278 aaPredicted RBP20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 CCT5P48643 541 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 PMS2P54278 862 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 STKLD1Q8NE28 680 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 AAASQ9NRG9 546 aa20.66■□□□□ 0.9
SEMA6C-201ENST00000341697 F5H423 210 aaPredicted RBP20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 STK25O00506 426 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 CLGNO14967 610 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 HOXA2O43364 376 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 ZC3H11AO75152 810 aaKnown RBP eCLIP20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 B3GAT3O94766 335 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 KRT17Q04695 432 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 YAF2Q8IY57 180 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 VCX3BQ9H321 246 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 ESYT3A0FGR9 886 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 GRAP2O75791 330 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 EPC2Q52LR7 807 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 IZUMO3Q5VZ72 239 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 JADE1Q6IE81 842 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 IRX2Q9BZI1 471 aaPredicted RBP20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 COL14A1Q05707 1796 aaKnown RBP20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 ARSEP51690 589 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 SKIV2LQ15477 1246 aaKnown RBP20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 PHLPP1O60346 1717 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 COPEO14579 308 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 HOXC6P09630 235 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 PDIA2Q13087 525 aaKnown RBP20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 NR1H3Q13133 447 aa20.65■□□□□ 0.9
SEMA6C-201ENST00000341697 ACVR2BQ13705 512 aa20.64■□□□□ 0.9
SEMA6C-201ENST00000341697 NUDT18Q6ZVK8 323 aa20.64■□□□□ 0.9
SEMA6C-201ENST00000341697 TLK2Q86UE8 772 aa20.64■□□□□ 0.9
SEMA6C-201ENST00000341697 ASIC4Q96FT7 647 aa20.64■□□□□ 0.9
SEMA6C-201ENST00000341697 CPB2Q96IY4 423 aa20.64■□□□□ 0.9
SEMA6C-201ENST00000341697 TAC1P20366 129 aa20.64■□□□□ 0.89
SEMA6C-201ENST00000341697 RSRC1Q96IZ7 334 aaKnown RBP20.64■□□□□ 0.89
SEMA6C-201ENST00000341697 PNMA5Q96PV4 448 aa20.64■□□□□ 0.89
SEMA6C-201ENST00000341697 OSMRQ99650 979 aa20.64■□□□□ 0.89
SEMA6C-201ENST00000341697 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.64■□□□□ 0.89
SEMA6C-201ENST00000341697 ATG16L1Q676U5 607 aa20.64■□□□□ 0.89
SEMA6C-201ENST00000341697 SEPT8Q92599 483 aa20.64■□□□□ 0.89
SEMA6C-201ENST00000341697 TMEM169Q96HH4 297 aa20.64■□□□□ 0.89
SEMA6C-201ENST00000341697 ZC3H4Q9UPT8 1303 aaKnown RBP20.64■□□□□ 0.89
SEMA6C-201ENST00000341697 WDR91A4D1P6 747 aa20.64■□□□□ 0.89
SEMA6C-201ENST00000341697 GPD1P21695 349 aa20.64■□□□□ 0.89
SEMA6C-201ENST00000341697 AMACRQ9UHK6 382 aa20.64■□□□□ 0.89
SEMA6C-201ENST00000341697 NOL3O60936 208 aaKnown RBP20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 TMEM119Q4V9L6 283 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 IQSEC1Q6DN90 963 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 A0A087WUV0 522 aaPredicted RBP20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 MX2P20592 715 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 PCK1P35558 622 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 IRX4P78413 519 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 RBM43Q6ZSC3 357 aaKnown RBP20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 SRRM1Q8IYB3 904 aaKnown RBP20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 KCNF1Q9H3M0 494 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 KIAA1257Q9ULG3 409 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 HMBSP08397 361 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 CYP24A1Q07973 514 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 ZBED8Q8IZ13 594 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 SLITRK1Q96PX8 696 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 INTUQ9ULD6 942 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 PLAGL2Q9UPG8 496 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 FIS1Q9Y3D6 152 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 SOX10P56693 466 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 TSNAXIP1Q2TAA8 658 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 DCAF6Q58WW2 860 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 SYDE1Q6ZW31 735 aaPredicted RBP20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 CEP120Q8N960 986 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 NUF2Q9BZD4 464 aa20.63■□□□□ 0.89
SEMA6C-201ENST00000341697 RASA4BC9J798 803 aa20.62■□□□□ 0.89
SEMA6C-201ENST00000341697 RASA4O43374 803 aa20.62■□□□□ 0.89
SEMA6C-201ENST00000341697 ALDH1A3P47895 512 aa20.62■□□□□ 0.89
SEMA6C-201ENST00000341697 WDR49Q8IV35 697 aa20.62■□□□□ 0.89
SEMA6C-201ENST00000341697 ATP11CQ8NB49 1132 aa20.62■□□□□ 0.89
SEMA6C-201ENST00000341697 SLC7A14Q8TBB6 771 aa20.62■□□□□ 0.89
SEMA6C-201ENST00000341697 FEZF2Q8TBJ5 459 aa20.62■□□□□ 0.89
SEMA6C-201ENST00000341697 SPIRE2Q8WWL2 714 aa20.62■□□□□ 0.89
SEMA6C-201ENST00000341697 PRAMEP78395 509 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms