RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 LARSQ9P2J5 1176 aaKnown RBP11.24□□□□□ -0.61
TPM3-207ENST00000341372 HCSTQ9UBK5 93 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 PCDHA7Q9UN72 937 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 MAPK8IP1Q9UQF2 711 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 ATP6V1DQ9Y5K8 247 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 CCDC169A6NNP5 214 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 BHMG1C9JSJ3 638 aaPredicted RBP11.23□□□□□ -0.61
TPM3-207ENST00000341372 H0YCG3 227 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 MAPTP10636 758 aaKnown RBP11.23□□□□□ -0.61
TPM3-207ENST00000341372 GPM6BQ13491 265 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 COL9A2Q14055 689 aaPredicted RBP11.23□□□□□ -0.61
TPM3-207ENST00000341372 SEPT6Q14141 434 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 NT5DC1Q5TFE4 455 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 RESP18Q5W5W9 173 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 GLB1LQ6UWU2 654 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 RELL1Q8IUW5 271 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 COLGALT1Q8NBJ5 622 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 ZDHHC1Q8WTX9 485 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 NXF3Q9H4D5 531 aaKnown RBP11.23□□□□□ -0.61
TPM3-207ENST00000341372 PARVGQ9HBI0 331 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 ARNT2Q9HBZ2 717 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 RAB6BQ9NRW1 208 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 PPT2Q9UMR5 302 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 TNFSF13BQ9Y275 285 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 MYO7AQ13402 2215 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 TDRD15B5MCY1 1934 aaKnown RBP11.23□□□□□ -0.61
TPM3-207ENST00000341372 BRWD1Q9NSI6 2320 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 MYMKA6NI61 221 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 K7ERI5 159 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 GABBR2O75899 941 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 ITGA4P13612 1032 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 PROZP22891 400 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 STAT6P42226 847 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 NUCB2P80303 420 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 FAM160A1Q05DH4 1040 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 DCAF4L1Q3SXM0 396 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 NOMO2Q5JPE7 1267 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 EEF1DP3Q658K8 133 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 SV2BQ7L1I2 683 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 LEO1Q8WVC0 666 aaPredicted RBP11.23□□□□□ -0.61
TPM3-207ENST00000341372 DNAJC19Q96DA6 116 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 MRPL38Q96DV4 380 aaKnown RBP11.23□□□□□ -0.61
TPM3-207ENST00000341372 ACO2Q99798 780 aaKnown RBP11.23□□□□□ -0.61
TPM3-207ENST00000341372 PTPRHQ9HD43 1115 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 AAASQ9NRG9 546 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 TBC1D13Q9NVG8 400 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 PLAGL2Q9UPG8 496 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 GIT1Q9Y2X7 761 aa11.23□□□□□ -0.61
TPM3-207ENST00000341372 EYSQ5T1H1 3165 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 FRMD3A2A2Y4 597 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 ARHGAP33O14559 1287 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 ABLIM1O14639 778 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 SLC16A4O15374 487 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 NPTXRO95502 500 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 ITGB1P05556 798 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 ME1P48163 572 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 UBE3AQ05086 875 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 TCEA2Q15560 299 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 ATF7IP2Q5U623 682 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 CDR2LQ86X02 465 aaPredicted RBP11.22□□□□□ -0.61
TPM3-207ENST00000341372 THNSL2Q86YJ6 484 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 HACE1Q8IYU2 909 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 KLHL23Q8NBE8 558 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 TTC16Q8NEE8 873 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 ADPGKQ9BRR6 497 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 MRPL4Q9BYD3 311 aaKnown RBP11.22□□□□□ -0.61
TPM3-207ENST00000341372 TRIM6Q9C030 488 aaPredicted RBP11.22□□□□□ -0.61
TPM3-207ENST00000341372 TNMDQ9H2S6 317 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 ST6GALNAC4Q9H4F1 302 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 SFMBT1Q9UHJ3 866 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 HES2Q9Y543 173 aa11.22□□□□□ -0.61
TPM3-207ENST00000341372 GRM6O15303 877 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 TBCAO75347 108 aaKnown RBP11.21□□□□□ -0.61
TPM3-207ENST00000341372 PIGRP01833 764 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 PPM1AP35813 382 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 WNT7BP56706 349 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 PWP1Q13610 501 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 CAMK1Q14012 370 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 TIGD5Q53EQ6 642 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 CNNM4Q6P4Q7 775 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 SLC39A11Q8N1S5 342 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 SLC17A8Q8NDX2 589 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 SPPL3Q8TCT6 385 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 URGCPQ8TCY9 931 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 CHAMP1Q96JM3 812 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 SCAND2PQ9GZW5 306 aaPredicted RBP11.21□□□□□ -0.61
TPM3-207ENST00000341372 MAGEF1Q9HAY2 307 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 KANSL3Q9P2N6 904 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 SEL1LQ9UBV2 794 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 LZTS1Q9Y250 596 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 PCDHB12Q9Y5F1 795 aa11.21□□□□□ -0.61
TPM3-207ENST00000341372 FAM237AA0A1B0GTK4 181 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 KRT18P05783 430 aaKnown RBP11.21□□□□□ -0.62
TPM3-207ENST00000341372 GARTP22102 1010 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 ABCD1P33897 745 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 AFF1P51825 1210 aaKnown RBP11.21□□□□□ -0.62
TPM3-207ENST00000341372 EPHB1P54762 984 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 DSC1Q08554 894 aa11.21□□□□□ -0.62
TPM3-207ENST00000341372 CCDC85BQ15834 202 aaPredicted RBP11.21□□□□□ -0.62
TPM3-207ENST00000341372 KCNT2Q6UVM3 1135 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms