RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 POU2F2P09086 479 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 SOX11P35716 441 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 MARSP56192 900 aaKnown RBP12.69□□□□□ -0.38
ATXN3-201ENST00000340660 RHDQ02161 417 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 TLR1Q15399 786 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 LIN9Q5TKA1 542 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 SLC23A3Q6PIS1 610 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 ACDQ96AP0 544 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 MED8Q96G25 268 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 ASB16Q96NS5 453 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 PSMG3-AS1Q96PY0 264 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 TMEM175Q9BSA9 504 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 KIAA1522Q9P206 1035 aaPredicted RBP12.69□□□□□ -0.38
ATXN3-201ENST00000340660 THADAQ6YHU6 1953 aa12.69□□□□□ -0.38
ATXN3-201ENST00000340660 RRP8O43159 456 aaKnown RBP12.68□□□□□ -0.38
ATXN3-201ENST00000340660 GPAA1O43292 621 aa12.68□□□□□ -0.38
ATXN3-201ENST00000340660 MYF5P13349 255 aa12.68□□□□□ -0.38
ATXN3-201ENST00000340660 MX2P20592 715 aa12.68□□□□□ -0.38
ATXN3-201ENST00000340660 FGFR4P22455 802 aa12.68□□□□□ -0.38
ATXN3-201ENST00000340660 KPNA1P52294 538 aaPredicted RBP12.68□□□□□ -0.38
ATXN3-201ENST00000340660 ATXN3P54252 364 aaPredicted RBP12.68□□□□□ -0.38
ATXN3-201ENST00000340660 TLE3Q04726 772 aa12.68□□□□□ -0.38
ATXN3-201ENST00000340660 GPATCH4Q5T3I0 446 aaKnown RBP12.68□□□□□ -0.38
ATXN3-201ENST00000340660 MINDY1Q8N5J2 469 aa12.68□□□□□ -0.38
ATXN3-201ENST00000340660 GIMAP8Q8ND71 665 aaPredicted RBP12.68□□□□□ -0.38
ATXN3-201ENST00000340660 CSGALNACT1Q8TDX6 532 aa12.68□□□□□ -0.38
ATXN3-201ENST00000340660 RHBDD1Q8TEB9 315 aa12.68□□□□□ -0.38
ATXN3-201ENST00000340660 TTC9Q92623 222 aa12.68□□□□□ -0.38
ATXN3-201ENST00000340660 APOL6Q9BWW8 343 aa12.68□□□□□ -0.38
ATXN3-201ENST00000340660 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.68□□□□□ -0.38
ATXN3-201ENST00000340660 ATXN2Q99700 1313 aaKnown RBP12.67□□□□□ -0.38
ATXN3-201ENST00000340660 ADAMTS9Q9P2N4 1935 aa12.67□□□□□ -0.38
ATXN3-201ENST00000340660 PATL2C9JE40 543 aaKnown RBP12.67□□□□□ -0.38
ATXN3-201ENST00000340660 PPP1R11O60927 126 aaPredicted RBP12.67□□□□□ -0.38
ATXN3-201ENST00000340660 DKK1O94907 266 aa12.67□□□□□ -0.38
ATXN3-201ENST00000340660 RHOP08100 348 aa12.67□□□□□ -0.38
ATXN3-201ENST00000340660 VIPR2P41587 438 aa12.67□□□□□ -0.38
ATXN3-201ENST00000340660 GDF10P55107 478 aa12.67□□□□□ -0.38
ATXN3-201ENST00000340660 GLRX5Q86SX6 157 aa12.67□□□□□ -0.38
ATXN3-201ENST00000340660 NAXDQ8IW45 347 aa12.67□□□□□ -0.38
ATXN3-201ENST00000340660 DAGLBQ8NCG7 672 aa12.67□□□□□ -0.38
ATXN3-201ENST00000340660 TTC8Q8TAM2 541 aa12.67□□□□□ -0.38
ATXN3-201ENST00000340660 SLC7A14Q8TBB6 771 aa12.67□□□□□ -0.38
ATXN3-201ENST00000340660 DEPDC1BQ8WUY9 529 aa12.67□□□□□ -0.38
ATXN3-201ENST00000340660 TNPO1Q92973 898 aaKnown RBP12.67□□□□□ -0.38
ATXN3-201ENST00000340660 EBF1Q9UH73 591 aa12.67□□□□□ -0.38
ATXN3-201ENST00000340660 VWA8A3KMH1 1905 aa12.66□□□□□ -0.38
ATXN3-201ENST00000340660 SPENQ96T58 3664 aaKnown RBP12.66□□□□□ -0.38
ATXN3-201ENST00000340660 M0R2C6 588 aa12.66□□□□□ -0.38
ATXN3-201ENST00000340660 PIK3CDO00329 1044 aa12.66□□□□□ -0.38
ATXN3-201ENST00000340660 EIF4BP23588 611 aaKnown RBP12.66□□□□□ -0.38
ATXN3-201ENST00000340660 MSX1P28360 303 aa12.66□□□□□ -0.38
ATXN3-201ENST00000340660 ZSCAN25Q6NSZ9 544 aa12.66□□□□□ -0.38
ATXN3-201ENST00000340660 RALGPS2Q86X27 583 aaPredicted RBP12.66□□□□□ -0.38
ATXN3-201ENST00000340660 SYT12Q8IV01 421 aa12.66□□□□□ -0.38
ATXN3-201ENST00000340660 ZSWIM3Q96MP5 696 aa12.66□□□□□ -0.38
ATXN3-201ENST00000340660 JMJD4Q9H9V9 463 aa12.66□□□□□ -0.38
ATXN3-201ENST00000340660 DNAAF2Q9NVR5 837 aaKnown RBP12.66□□□□□ -0.38
ATXN3-201ENST00000340660 DACT1Q9NYF0 836 aa12.66□□□□□ -0.38
ATXN3-201ENST00000340660 EXOC6BQ9Y2D4 811 aa12.66□□□□□ -0.38
ATXN3-201ENST00000340660 PCDH15Q96QU1 1955 aa12.66□□□□□ -0.38
ATXN3-201ENST00000340660 OTOGQ6ZRI0 2925 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 TNRC6BQ9UPQ9 1833 aaKnown RBP12.65□□□□□ -0.38
ATXN3-201ENST00000340660 ZBTB42B2RXF5 422 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 CBFA2T3O75081 653 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 ATG13O75143 517 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 CFIP05156 583 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 GRM4Q14833 912 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 PRSS36Q5K4E3 855 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 ZNF746Q6NUN9 644 aaPredicted RBP12.65□□□□□ -0.38
ATXN3-201ENST00000340660 PRSS55Q6UWB4 352 aaPredicted RBP12.65□□□□□ -0.38
ATXN3-201ENST00000340660 ARMCX6Q7L4S7 300 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 C11orf74Q86VG3 221 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 TCEAL4Q96EI5 215 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 SCARF2Q96GP6 870 aaPredicted RBP12.65□□□□□ -0.38
ATXN3-201ENST00000340660 ZNF668Q96K58 619 aaPredicted RBP12.65□□□□□ -0.38
ATXN3-201ENST00000340660 GPR62Q9BZJ7 368 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 AZI2Q9H6S1 392 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 RUBCNLQ9H714 662 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 ENAMQ9NRM1 1142 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 MAN2B2Q9Y2E5 1009 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 PI4KAP42356 2102 aa12.65□□□□□ -0.38
ATXN3-201ENST00000340660 EVPLQ92817 2033 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 BSNQ9UPA5 3926 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 A0A1B0GTL3 188 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 WDR27A2RRH5 827 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 CLEC18AA5D8T8 446 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
ATXN3-201ENST00000340660 PLK4O00444 970 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 GJB3O75712 270 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 C22orf31O95567 290 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 APBB3O95704 486 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 POLR2MP0CAP2 368 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 HLA-EP13747 358 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 GNAT2P19087 354 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 PTGER3P43115 390 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 NLRP11P59045 1033 aaKnown RBP12.64□□□□□ -0.39
ATXN3-201ENST00000340660 LBRQ14739 615 aaKnown RBP12.64□□□□□ -0.39
ATXN3-201ENST00000340660 CLEC18BQ6UXF7 455 aa12.64□□□□□ -0.39
ATXN3-201ENST00000340660 PLPPR4Q7Z2D5 763 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms