RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 OSBPL1AQ9BXW6 950 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 C1orf112Q9NSG2 853 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 PCDHB4Q9Y5E5 795 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 CFAP69A5D8W1 941 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 TLR3O15455 904 aaKnown RBP17.11■□□□□ 0.33
SCARB1-202ENST00000339570 LGR5O75473 907 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 GGPS1O95749 300 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 P4HBP07237 508 aaKnown RBP17.11■□□□□ 0.33
SCARB1-202ENST00000339570 PECAM1P16284 738 aaPredicted RBP17.11■□□□□ 0.33
SCARB1-202ENST00000339570 GBP1P32455 592 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 PIK3CAP42336 1068 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 QARSP47897 775 aaKnown RBP17.11■□□□□ 0.33
SCARB1-202ENST00000339570 PDIA2Q13087 525 aaKnown RBP17.11■□□□□ 0.33
SCARB1-202ENST00000339570 MTMR1Q13613 665 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 TAF1BQ53T94 588 aaPredicted RBP17.11■□□□□ 0.33
SCARB1-202ENST00000339570 APBB1IPQ7Z5R6 666 aaPredicted RBP17.11■□□□□ 0.33
SCARB1-202ENST00000339570 ZBTB10Q96DT7 871 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 MXRA8Q9BRK3 442 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 KIF1CO43896 1103 aaKnown RBP17.1■□□□□ 0.33
SCARB1-202ENST00000339570 OAS1P00973 400 aaKnown RBP17.1■□□□□ 0.33
SCARB1-202ENST00000339570 CHRNA5P30532 468 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 SSTR1P30872 391 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 CLUL1Q15846 466 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 CCDC6Q16204 474 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 SLC15A2Q16348 729 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 CROCCP2Q86T23 111 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 MTDHQ86UE4 582 aaKnown RBP17.1■□□□□ 0.33
SCARB1-202ENST00000339570 MCOLN2Q8IZK6 566 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 BSNDQ8WZ55 320 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 SMC6Q96SB8 1091 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 TMEM39BQ9GZU3 492 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 MRPL11Q9Y3B7 192 aaKnown RBP17.1■□□□□ 0.33
SCARB1-202ENST00000339570 KRT1P04264 644 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 GZMAP12544 262 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 NPTX2P47972 431 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 CLEC16AQ2KHT3 1053 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 GALNTL6Q49A17 601 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 KCNT1Q5JUK3 1230 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 SPDYCQ5MJ68 293 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 TXNRD3NBQ6F5E7 133 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 ANKRD35Q8N283 1001 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 LRRN4Q8WUT4 740 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 CEP170P1Q96L14 293 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 MAGEB18Q96M61 343 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 FNBP1Q96RU3 617 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 ARHGEF3Q9NR81 526 aa17.1■□□□□ 0.33
SCARB1-202ENST00000339570 GM2AP17900 193 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 KRT4P19013 534 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 DSG3P32926 999 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 ZBTB16Q05516 673 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 MTFR1Q15390 333 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 MEX3CQ5U5Q3 659 aaKnown RBP17.09■□□□□ 0.33
SCARB1-202ENST00000339570 LVRNQ6Q4G3 990 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 DPH6Q7L8W6 267 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 KIAA1586Q9HCI6 787 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 UVRAGQ9P2Y5 699 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 STK24Q9Y6E0 443 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 KDM4FA0A1W2PPD8 638 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 LRRD1A4D1F6 860 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 UNC5CO95185 931 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 WNT7BP56706 349 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 CYP1B1Q16678 543 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 TATDN1Q6P1N9 297 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 RFWD3Q6PCD5 774 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 TAAR1Q96RJ0 339 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 TBX20Q9UMR3 447 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 VIL1P09327 827 aaKnown RBP17.09■□□□□ 0.33
SCARB1-202ENST00000339570 DMP1Q13316 513 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-202ENST00000339570 SCARA5Q6ZMJ2 495 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 FMNL3Q8IVF7 1028 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 GMCL1P1Q8NEA9 526 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 ZBTB45Q96K62 511 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-202ENST00000339570 TBC1D10AQ9BXI6 508 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 ZWILCHQ9H900 591 aa17.09■□□□□ 0.33
SCARB1-202ENST00000339570 CTDP1Q9Y5B0 961 aaPredicted RBP17.09■□□□□ 0.33
SCARB1-202ENST00000339570 UMODL1Q5DID0 1318 aa17.08■□□□□ 0.33
SCARB1-202ENST00000339570 ZBED4O75132 1171 aa17.08■□□□□ 0.33
SCARB1-202ENST00000339570 MAP3K6O95382 1288 aa17.08■□□□□ 0.33
SCARB1-202ENST00000339570 MMP10P09238 476 aa17.08■□□□□ 0.33
SCARB1-202ENST00000339570 FDX1P10109 184 aa17.08■□□□□ 0.33
SCARB1-202ENST00000339570 ADRA1DP25100 572 aa17.08■□□□□ 0.33
SCARB1-202ENST00000339570 ABL2P42684 1182 aa17.08■□□□□ 0.33
SCARB1-202ENST00000339570 RHBDF2Q6PJF5 856 aa17.08■□□□□ 0.33
SCARB1-202ENST00000339570 MAGEC3Q8TD91 643 aa17.08■□□□□ 0.33
SCARB1-202ENST00000339570 GRK7Q8WTQ7 553 aa17.08■□□□□ 0.33
SCARB1-202ENST00000339570 CCDC134Q9H6E4 229 aa17.08■□□□□ 0.33
SCARB1-202ENST00000339570 EHMT1Q9H9B1 1298 aa17.08■□□□□ 0.33
SCARB1-202ENST00000339570 FGFR1P11362 822 aa17.08■□□□□ 0.32
SCARB1-202ENST00000339570 PTK6Q13882 451 aa17.08■□□□□ 0.32
SCARB1-202ENST00000339570 THEMIS2Q5TEJ8 643 aa17.08■□□□□ 0.32
SCARB1-202ENST00000339570 GBP7Q8N8V2 638 aaPredicted RBP17.08■□□□□ 0.32
SCARB1-202ENST00000339570 FAM13CQ8NE31 585 aa17.08■□□□□ 0.32
SCARB1-202ENST00000339570 DDX27Q96GQ7 796 aaKnown RBP17.08■□□□□ 0.32
SCARB1-202ENST00000339570 SLC5A4Q9NY91 659 aa17.08■□□□□ 0.32
SCARB1-202ENST00000339570 COL5A3P25940 1745 aaPredicted RBP17.08■□□□□ 0.32
SCARB1-202ENST00000339570 ORC1Q13415 861 aa17.08■□□□□ 0.32
SCARB1-202ENST00000339570 CYP4A22Q5TCH4 519 aa17.08■□□□□ 0.32
SCARB1-202ENST00000339570 MFSD7Q6UXD7 560 aa17.08■□□□□ 0.32
SCARB1-202ENST00000339570 SCYL3Q8IZE3 742 aa17.08■□□□□ 0.32
SCARB1-202ENST00000339570 CCDC89Q8N998 374 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms