RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 MKRN3Q13064 507 aaKnown RBP10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 PSMD6Q15008 389 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ANKRD20A4Q4UJ75 823 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 EGFLAMQ63HQ2 1017 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ARHGEF18Q6ZSZ5 1173 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 TMC7Q7Z402 723 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ZNF410Q86VK4 478 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 TTC30BQ8N4P2 665 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 LRRC57Q8N9N7 239 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 ATP2A3Q93084 1043 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 GINM1Q9NU53 330 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 STARD13Q9Y3M8 1113 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 CEPT1Q9Y6K0 416 aa10.2□□□□□ -0.78
PTCHD4-201ENST00000339488 PSMD11O00231 422 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 MXI1P50539 228 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 AP2B1P63010 937 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 IL9RQ01113 521 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 TOM1L2Q6ZVM7 507 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 EPM2AIP1Q7L775 607 aaPredicted RBP10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 DCLK2Q8N568 766 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 CCDC124Q96CT7 223 aaKnown RBP10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 EGLN2Q96KS0 407 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 ZNF512Q96ME7 567 aaPredicted RBP10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 LSM14BQ9BX40 385 aaKnown RBP10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 TMEM60Q9H2L4 133 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 EPB41L1Q9H4G0 881 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 SMYD3Q9H7B4 428 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 LY9Q9HBG7 655 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 PCDH11YQ9BZA8 1340 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 BICDL2A1A5D9 508 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 ARHGAP33O14559 1287 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 GNPATO15228 680 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 STRNO43815 780 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 KLRC4O43908 158 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 ENO1P06733 434 aaKnown RBP10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 MLLT3P42568 568 aaPredicted RBP10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 PTK2Q05397 1052 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 KDSRQ06136 332 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 KLHL30Q0D2K2 578 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 CTTNQ14247 550 aaKnown RBP10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 CARTPTQ16568 116 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 SLC18A3Q16572 532 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 SYCP2LQ5T4T6 812 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 KAZNQ674X7 775 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 MFSD5Q6N075 450 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 NANOGP8Q6NSW7 305 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 FBXL16Q8N461 479 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 GRIN3AQ8TCU5 1115 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 B3GNT4Q9C0J1 378 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 RNF38Q9H0F5 515 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 OSGEPQ9NPF4 335 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 PCDH12Q9NPG4 1184 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 OLFML3Q9NRN5 406 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 NDUFA13Q9P0J0 144 aa10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 RPL26L1Q9UNX3 145 aaKnown RBP10.19□□□□□ -0.78
PTCHD4-201ENST00000339488 B2RBV5 119 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 AQP9O43315 295 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 CYTH3O43739 400 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 TBC1D12O60347 775 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 EDF1O60869 148 aaKnown RBP10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 PHKA2P46019 1235 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 AP3M2P53677 418 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 PDE4DQ08499 809 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 KRT81Q14533 505 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 FIGNQ5HY92 759 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 TMEM63BQ5T3F8 832 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 TTC27Q6P3X3 843 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 PPP1R21Q6ZMI0 780 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 LZTR1Q8N653 840 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 ESX1Q8N693 406 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 PDZD8Q8NEN9 1154 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 SLC26A7Q8TE54 656 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 CAPSLQ8WWF8 208 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 GRAMD1AQ96CP6 724 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 NSL1Q96IY1 281 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 KLHL25Q9H0H3 589 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 WDR6Q9NNW5 1121 aaKnown RBP10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 TBC1D23Q9NUY8 699 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 SLC7A8Q9UHI5 535 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 MYH11P35749 1972 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 A8MX80 341 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 RSPH10B2B2RC85 870 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 PEX1O43933 1283 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 IFIT1P09914 478 aaKnown RBP10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 RSPH10BP0C881 870 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 NCKAP1LP55160 1127 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 PTENP60484 403 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 MYBPC1Q00872 1141 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 PTPN12Q05209 780 aaKnown RBP10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 TRIP13Q15645 432 aaPredicted RBP10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 TTC38Q5R3I4 469 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 FAM83BQ5T0W9 1011 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 BTNL9Q6UXG8 535 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 PNPLA7Q6ZV29 1317 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 LPCAT2Q7L5N7 544 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 DHDDSQ86SQ9 333 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 ZSCAN29Q8IWY8 852 aaPredicted RBP10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 TTC39CQ8N584 583 aa10.18□□□□□ -0.78
PTCHD4-201ENST00000339488 TPCN2Q8NHX9 752 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms