RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ZBTB48P10074 688 aaPredicted RBP13.34□□□□□ -0.27
DFFB-202ENST00000339350 ENDOUP21128 410 aaKnown RBP13.34□□□□□ -0.27
DFFB-202ENST00000339350 MARSP56192 900 aaKnown RBP13.34□□□□□ -0.27
DFFB-202ENST00000339350 OCRLQ01968 901 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 MGAT5Q09328 741 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 CAMK2BQ13554 666 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 MTMR3Q13615 1198 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 LRP8Q14114 963 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 CTTNQ14247 550 aaKnown RBP13.34□□□□□ -0.27
DFFB-202ENST00000339350 TMEM214Q6NUQ4 689 aaKnown RBP13.34□□□□□ -0.27
DFFB-202ENST00000339350 KBTBD2Q8IY47 623 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 SLC35C1Q96A29 364 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 CCDC68Q9H2F9 335 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 KIAA1522Q9P206 1035 aaPredicted RBP13.34□□□□□ -0.27
DFFB-202ENST00000339350 ZNF148Q9UQR1 794 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 ASTN1O14525 1302 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 PPEF1O14829 653 aaPredicted RBP13.34□□□□□ -0.27
DFFB-202ENST00000339350 MMP10P09238 476 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 CYP2J2P51589 502 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 UBXN2AP68543 259 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 CCSAPQ6IQ19 270 aaPredicted RBP13.34□□□□□ -0.27
DFFB-202ENST00000339350 MAMSTRQ6ZN01 415 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 DTX3LQ8TDB6 740 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 SERPINB13Q9UIV8 391 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 AMFRQ9UKV5 643 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 DNM3Q9UQ16 869 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 THSD7AQ9UPZ6 1657 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 FAM86B1E9PN63 330 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 PDE5AO76074 875 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 APBA3O96018 575 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 FAM86B2P0C5J1 330 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 SPATA31C1P0DKV0 1188 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 IL4RP24394 825 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 RXRGP48443 463 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 WDR72Q3MJ13 1102 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 CRY2Q49AN0 593 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 TBC1D10BQ4KMP7 808 aaPredicted RBP13.34□□□□□ -0.27
DFFB-202ENST00000339350 LRRC74BQ6ZQY2 392 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 HS2ST1Q7LGA3 356 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 MYO1HQ8N1T3 1032 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 FMO2Q99518 471 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 TBC1D10AQ9BXI6 508 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 AZI2Q9H6S1 392 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 SSX2IPQ9Y2D8 614 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 MROH7Q68CQ1 1323 aa13.34□□□□□ -0.27
DFFB-202ENST00000339350 GJB6O95452 261 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 SNHG28P0DPA3 235 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 HSPA8P11142 646 aaKnown RBP13.33□□□□□ -0.28
DFFB-202ENST00000339350 CDK4P11802 303 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 MARCKSL1P49006 195 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 PMS2P54278 862 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 EMP3P54852 163 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 EDRF1Q3B7T1 1238 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 TMEM259Q4ZIN3 620 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 ZNF746Q6NUN9 644 aaPredicted RBP13.33□□□□□ -0.28
DFFB-202ENST00000339350 VSIG1Q86XK7 387 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 CPNE8Q86YQ8 564 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 OLFM3Q96PB7 478 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 ZC3H12CQ9C0D7 883 aaKnown RBP13.33□□□□□ -0.28
DFFB-202ENST00000339350 DRC3Q9H069 523 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 THAP2Q9H0W7 228 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 MLXIPLQ9NP71 852 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 TXLNGQ9NUQ3 528 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 USP40Q9NVE5 1235 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 SCAF8Q9UPN6 1271 aaKnown RBP13.33□□□□□ -0.28
DFFB-202ENST00000339350 MYPNQ86TC9 1320 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 FOXO6A8MYZ6 492 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 OXSR1O95747 527 aaPredicted RBP13.33□□□□□ -0.28
DFFB-202ENST00000339350 SHMT1P34896 483 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 ARHGAP4P98171 946 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 PDE1BQ01064 536 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 CYLC2Q14093 348 aaPredicted RBP13.33□□□□□ -0.28
DFFB-202ENST00000339350 DRAP1Q14919 205 aaPredicted RBP13.33□□□□□ -0.28
DFFB-202ENST00000339350 KLHL35Q6PF15 583 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 NEK10Q6ZWH5 1172 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 FRMD5Q7Z6J6 570 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 SATL1Q86VE3 508 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 VPS36Q86VN1 386 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 AGGF1Q8N302 714 aaeCLIP13.33□□□□□ -0.283e-8■■■■■ 69.3
DFFB-202ENST00000339350 C18orf8Q96DM3 657 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 ASCC2Q9H1I8 757 aaPredicted RBP13.33□□□□□ -0.28
DFFB-202ENST00000339350 LRMDAQ9H2I8 198 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 STXBP5LQ9Y2K9 1186 aa13.33□□□□□ -0.28
DFFB-202ENST00000339350 TMA7Q9Y2S6 64 aaKnown RBP13.33□□□□□ -0.28
DFFB-202ENST00000339350 hCG_1984214I3L0E3 225 aa13.32□□□□□ -0.28
DFFB-202ENST00000339350 EML1O00423 815 aa13.32□□□□□ -0.28
DFFB-202ENST00000339350 CAPN9O14815 690 aa13.32□□□□□ -0.28
DFFB-202ENST00000339350 KRT36O76013 467 aa13.32□□□□□ -0.28
DFFB-202ENST00000339350 CHRNA5P30532 468 aa13.32□□□□□ -0.28
DFFB-202ENST00000339350 SKIV2L2P42285 1042 aaKnown RBP13.32□□□□□ -0.28
DFFB-202ENST00000339350 TBL3Q12788 808 aaKnown RBP13.32□□□□□ -0.28
DFFB-202ENST00000339350 WASHC2DQ5SRD0 308 aa13.32□□□□□ -0.28
DFFB-202ENST00000339350 ZNF449Q6P9G9 518 aa13.32□□□□□ -0.28
DFFB-202ENST00000339350 ELMO3Q96BJ8 720 aa13.32□□□□□ -0.28
DFFB-202ENST00000339350 DNAJC12Q9UKB3 198 aa13.32□□□□□ -0.28
DFFB-202ENST00000339350 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
DFFB-202ENST00000339350 NHSQ6T4R5 1651 aa13.32□□□□□ -0.28
DFFB-202ENST00000339350 PASKQ96RG2 1323 aa13.32□□□□□ -0.28
DFFB-202ENST00000339350 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
DFFB-202ENST00000339350 CALUO43852 315 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms