RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 BATF3Q9NR55 127 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 H3BQF6 201 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 POLRMTO00411 1230 aaKnown RBP14.47□□□□□ -0.09
RTN4-202ENST00000337526 CST8O60676 142 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 HNRNPH1P31943 449 aaKnown RBP14.47□□□□□ -0.09
RTN4-202ENST00000337526 ITPK1Q13572 414 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 MXRA8Q9BRK3 442 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 ABCF3Q9NUQ8 709 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 XPO7Q9UIA9 1087 aaKnown RBP14.47□□□□□ -0.09
RTN4-202ENST00000337526 SNX2O60749 519 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 CCND1P24385 295 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 NSUN2Q08J23 767 aaKnown RBP eCLIP14.47□□□□□ -0.09
RTN4-202ENST00000337526 EZH2Q15910 746 aaKnown RBP14.47□□□□□ -0.09
RTN4-202ENST00000337526 PI4K2AQ9BTU6 479 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 KIF9Q9HAQ2 790 aa14.47□□□□□ -0.09
RTN4-202ENST00000337526 PPP1R12AO14974 1030 aaPredicted RBP14.46□□□□□ -0.09
RTN4-202ENST00000337526 RALAP11233 206 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 ELF1P32519 619 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 MTMR2Q13614 643 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 RARS2Q5T160 578 aaKnown RBP14.46□□□□□ -0.09
RTN4-202ENST00000337526 PDCD6IPQ8WUM4 868 aaKnown RBP14.46□□□□□ -0.09
RTN4-202ENST00000337526 NCLNQ969V3 563 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 IFT43Q96FT9 208 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 AGAP3Q96P47 875 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 PACSIN1Q9BY11 444 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 KLC1Q07866 573 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 MDH1BQ5I0G3 518 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 MTHFD1LQ6UB35 978 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 FBXL16Q8N461 479 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 SPATA18Q8TC71 538 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 SNX9Q9Y5X1 595 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 CEP170BQ9Y4F5 1589 aaPredicted RBP14.46□□□□□ -0.09
RTN4-202ENST00000337526 GNAT1P11488 350 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 KLRK1P26718 216 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 RGS7P49802 495 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 ARHGAP18Q8N392 663 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 BEGAINQ9BUH8 593 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 ANKZF1Q9H8Y5 726 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 KCNH7Q9NS40 1196 aa14.46□□□□□ -0.09
RTN4-202ENST00000337526 ARHGAP10A1A4S6 786 aa14.46□□□□□ -0.1
RTN4-202ENST00000337526 RSPH10B2B2RC85 870 aa14.46□□□□□ -0.1
RTN4-202ENST00000337526 MSH4O15457 936 aa14.46□□□□□ -0.1
RTN4-202ENST00000337526 RSPH10BP0C881 870 aa14.46□□□□□ -0.1
RTN4-202ENST00000337526 LCP1P13796 627 aa14.46□□□□□ -0.1
RTN4-202ENST00000337526 FNTAP49354 379 aa14.46□□□□□ -0.1
RTN4-202ENST00000337526 TSPY1Q01534 308 aa14.46□□□□□ -0.1
RTN4-202ENST00000337526 ZBTB17Q13105 803 aa14.46□□□□□ -0.1
RTN4-202ENST00000337526 DNAJC3Q13217 504 aa14.46□□□□□ -0.1
RTN4-202ENST00000337526 TNIP3Q96KP6 325 aa14.46□□□□□ -0.1
RTN4-202ENST00000337526 ZSWIM1Q9BR11 485 aa14.46□□□□□ -0.1
RTN4-202ENST00000337526 CASP4P49662 377 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 PTK7Q13308 1070 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 FRA10AC1Q70Z53 315 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 TEX2Q8IWB9 1127 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 LRRC34Q8IZ02 419 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 ZC3H15Q8WU90 426 aaKnown RBP14.45□□□□□ -0.1
RTN4-202ENST00000337526 OLFM3Q96PB7 478 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 PPRC1Q5VV67 1664 aaKnown RBP14.45□□□□□ -0.1
RTN4-202ENST00000337526 CD163L1Q9NR16 1453 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 MED24O75448 989 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 MOCS2O96007 188 aaPredicted RBP14.45□□□□□ -0.1
RTN4-202ENST00000337526 PKN1Q16512 942 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 LRRC36Q1X8D7 754 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 LVRNQ6Q4G3 990 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 RIBC1Q8N443 379 aaPredicted RBP14.45□□□□□ -0.1
RTN4-202ENST00000337526 MTBPQ96DY7 904 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 ZBTB24O43167 697 aaPredicted RBP14.45□□□□□ -0.1
RTN4-202ENST00000337526 ARHGDIAP52565 204 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 SNRPFP62306 86 aaKnown RBP14.45□□□□□ -0.1
RTN4-202ENST00000337526 CENPCQ03188 943 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 MXD4Q14582 209 aaPredicted RBP14.45□□□□□ -0.1
RTN4-202ENST00000337526 DNAL1Q4LDG9 190 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
RTN4-202ENST00000337526 FBXO25Q8TCJ0 367 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 SEPT1Q8WYJ6 367 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 RMDN2Q96LZ7 410 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 SERPINB12Q96P63 405 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 BAZ2BQ9UIF8 2168 aaKnown RBP14.45□□□□□ -0.1
RTN4-202ENST00000337526 B2RBV5 119 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 IGF2BP3O00425 579 aaKnown RBP eCLIP14.45□□□□□ -0.16e-8■■□□□ 13.7
RTN4-202ENST00000337526 MYL3P08590 195 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 COL23A1Q86Y22 540 aaPredicted RBP14.45□□□□□ -0.1
RTN4-202ENST00000337526 FEZF2Q8TBJ5 459 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 THTPAQ9BU02 230 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 RUSC1Q9BVN2 902 aa14.45□□□□□ -0.1
RTN4-202ENST00000337526 SNRPAP09012 282 aaKnown RBP14.44□□□□□ -0.1
RTN4-202ENST00000337526 WEE2P0C1S8 567 aa14.44□□□□□ -0.1
RTN4-202ENST00000337526 KRT4P19013 534 aa14.44□□□□□ -0.1
RTN4-202ENST00000337526 SARSP49591 514 aaKnown RBP14.44□□□□□ -0.1
RTN4-202ENST00000337526 RBP5P82980 135 aa14.44□□□□□ -0.1
RTN4-202ENST00000337526 ZBTB41Q5SVQ8 909 aa14.44□□□□□ -0.1
RTN4-202ENST00000337526 ZNF677Q86XU0 584 aa14.44□□□□□ -0.1
RTN4-202ENST00000337526 LINC00116Q8NCU8 138 aa14.44□□□□□ -0.1
RTN4-202ENST00000337526 LRRN4CLQ8ND94 238 aa14.44□□□□□ -0.1
RTN4-202ENST00000337526 TXNP10599 105 aaKnown RBP14.44□□□□□ -0.1
RTN4-202ENST00000337526 FOXD4Q12950 439 aaPredicted RBP14.44□□□□□ -0.1
RTN4-202ENST00000337526 MED21Q13503 144 aa14.44□□□□□ -0.1
RTN4-202ENST00000337526 ULK4Q96C45 1275 aa14.44□□□□□ -0.1
RTN4-202ENST00000337526 ZNF560Q96MR9 790 aa14.44□□□□□ -0.1
RTN4-202ENST00000337526 CXorf56Q9H5V9 222 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms