RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ZSCAN5DPP0CG00 497 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 UNGP13051 313 aaPredicted RBP9.44□□□□□ -0.9
SNCA-201ENST00000336904 ACO1P21399 889 aaKnown RBP9.44□□□□□ -0.9
SNCA-201ENST00000336904 GARTP22102 1010 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 RFX1P22670 979 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 KRT17Q04695 432 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 PSMD6Q15008 389 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 KCNT1Q5JUK3 1230 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 C11orf63Q6NUN7 778 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 DHX37Q8IY37 1157 aaKnown RBP9.44□□□□□ -0.9
SNCA-201ENST00000336904 MSL3Q8N5Y2 521 aaKnown RBP9.44□□□□□ -0.9
SNCA-201ENST00000336904 GLIS1Q8NBF1 620 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 MGARPQ8TDB4 240 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 MCEEQ96PE7 176 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 CEP89Q96ST8 783 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 TMBIM4Q9HC24 238 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 ZDHHC18Q9NUE0 388 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 HMGXB4Q9UGU5 601 aa9.44□□□□□ -0.9
SNCA-201ENST00000336904 CNTNAP2Q9UHC6 1331 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 A0A0B4J269 797 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 F8VP50 259 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 PRKCBP05771 671 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 TXNP10599 105 aaKnown RBP9.43□□□□□ -0.9
SNCA-201ENST00000336904 YBX3P16989 372 aaKnown RBP eCLIP9.43□□□□□ -0.9
SNCA-201ENST00000336904 IBSPP21815 317 aaPredicted RBP9.43□□□□□ -0.9
SNCA-201ENST00000336904 ANXA13P27216 316 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 LSP1P33241 339 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 NAMPTP43490 491 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 NRLP54845 237 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 RWDD2BP57060 319 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 SIX1Q15475 284 aaPredicted RBP9.43□□□□□ -0.9
SNCA-201ENST00000336904 LONRF1Q17RB8 773 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 C15orf39Q6ZRI6 1047 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 EFCAB13Q8IY85 973 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 EMC1Q8N766 993 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 TFAP2BQ92481 460 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 TIPINQ9BVW5 301 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 EPB41L4BQ9H329 900 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 HTTP42858 3142 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 ZBTB42B2RXF5 422 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 CES2O00748 559 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 SOCS7O14512 581 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 HGSO14964 777 aaPredicted RBP9.43□□□□□ -0.9
SNCA-201ENST00000336904 TLR3O15455 904 aaKnown RBP9.43□□□□□ -0.9
SNCA-201ENST00000336904 ADCY3O60266 1144 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 CLTAP09496 248 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 GZMAP12544 262 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 CREB1P16220 341 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 COILP38432 576 aaPredicted RBP9.43□□□□□ -0.9
SNCA-201ENST00000336904 IFNAR2P48551 515 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 LIG3P49916 1009 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 ZNF568Q3ZCX4 644 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 SRLQ86TD4 932 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 RDM1Q8NG50 284 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 SEPT1Q8WYJ6 367 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 LENG1Q96BZ8 264 aaPredicted RBP9.43□□□□□ -0.9
SNCA-201ENST00000336904 CDCA5Q96FF9 252 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 GPR20Q99678 358 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 TBK1Q9UHD2 729 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 PCDHA3Q9Y5H8 950 aa9.43□□□□□ -0.9
SNCA-201ENST00000336904 MSCO60682 206 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 FDX1P10109 184 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 GJA5P36382 358 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 PMS2P54278 862 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 RAB6CQ53S08 254 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 C9orf131Q5VYM1 1079 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 EFCAB12Q6NXP0 572 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 XRRA1Q6P2D8 792 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 RIOX2Q8IUF8 465 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 CHST13Q8NET6 341 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 SCLT1Q96NL6 688 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 MMP19Q99542 508 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 RAB6CQ9H0N0 254 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 RAB17Q9H0T7 212 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 PCDHB2Q9Y5E7 798 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.42□□□□□ -0.9
SNCA-201ENST00000336904 ATP2A1O14983 1001 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 MAP3K6O95382 1288 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 NFICP08651 508 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 NOMO3P69849 1222 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 OGDHQ02218 1023 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 GCNT1Q02742 428 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 KCTD2Q14681 263 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 LRRC14Q15048 493 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 PLCB4Q15147 1175 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 QPCTQ16769 361 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 USP37Q86T82 979 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 ZNF606Q8WXB4 792 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 LRRC45Q96CN5 670 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 NRBP2Q9NSY0 501 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 GOLGA8MH3BSY2 632 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 DKC1O60832 514 aaKnown RBP eCLIP9.42□□□□□ -0.9
SNCA-201ENST00000336904 PPFIA4O75335 1185 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 BANF1O75531 89 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 GRAP2O75791 330 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 ATG7O95352 703 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 MAMLD1Q13495 774 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 TRPC3Q13507 836 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 WDR72Q3MJ13 1102 aa9.42□□□□□ -0.9
SNCA-201ENST00000336904 GPAT2Q6NUI2 795 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms