RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 CBWD5Q5RIA9 395 aa6.86□□□□□ -1.31
HMG20A-201ENST00000336216 FAM102AQ5T9C2 384 aaPredicted RBP6.86□□□□□ -1.31
HMG20A-201ENST00000336216 AGBL2Q5U5Z8 902 aa6.86□□□□□ -1.31
HMG20A-201ENST00000336216 ANKRD20A3Q5VUR7 823 aa6.86□□□□□ -1.31
HMG20A-201ENST00000336216 DNAAF3Q8N9W5 541 aa6.86□□□□□ -1.31
HMG20A-201ENST00000336216 AGBL3Q8NEM8 1001 aa6.86□□□□□ -1.31
HMG20A-201ENST00000336216 UBA3Q8TBC4 463 aa6.86□□□□□ -1.31
HMG20A-201ENST00000336216 KIF12Q96FN5 646 aa6.86□□□□□ -1.31
HMG20A-201ENST00000336216 INPP4AQ96PE3 977 aaPredicted RBP6.86□□□□□ -1.31
HMG20A-201ENST00000336216 LRRC4Q9HBW1 653 aa6.86□□□□□ -1.31
HMG20A-201ENST00000336216 NR2E1Q9Y466 385 aa6.86□□□□□ -1.31
HMG20A-201ENST00000336216 USH1CQ9Y6N9 552 aa6.86□□□□□ -1.31
HMG20A-201ENST00000336216 LAMA4Q16363 1823 aa6.86□□□□□ -1.31
HMG20A-201ENST00000336216 PRKCBP05771 671 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 ITGB5P18084 799 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 ALDH5A1P51649 535 aaPredicted RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 GPC3P51654 580 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 GSCP56915 257 aaPredicted RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 CDK17Q00537 523 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 GPS1Q13098 491 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 TTLL4Q14679 1199 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 PSMD6Q15008 389 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 RASIP1Q5U651 963 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 C1orf228Q6PIY5 440 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 SH3BP5LQ7L8J4 393 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 KDELC2Q7Z4H8 507 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 ANKMY2Q8IV38 441 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 C4orf32Q8N8J7 132 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 PPFIBP2Q8ND30 876 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 LRRC15Q8TF66 581 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 MAIP1Q8WWC4 291 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 PRPF31Q8WWY3 499 aaKnown RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 SMC6Q96SB8 1091 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 ERP44Q9BS26 406 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 WDR18Q9BV38 432 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 IDI2Q9BXS1 227 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 SLITRK6Q9H5Y7 841 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 SLC38A10Q9HBR0 1119 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 SPON1Q9HCB6 807 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 SLC5A4Q9NY91 659 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 KLK14Q9P0G3 267 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 PNMA3Q9UL41 463 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 PPP1R9AQ9ULJ8 1098 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 TBX20Q9UMR3 447 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 USP15Q9Y4E8 981 aaPredicted RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 UBE4BO95155 1302 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 YDJCA8MPS7 323 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 EGFRP00533 1210 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 NQO1P15559 274 aaKnown RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 PDE1BQ01064 536 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 RNASELQ05823 741 aaKnown RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 CACNB2Q08289 660 aaPredicted RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 PPP2R5EQ16537 467 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 DAB2IPQ5VWQ8 1189 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 EFCAB12Q6NXP0 572 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 SV2AQ7L0J3 742 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 SPDYE1Q8NFV5 336 aaPredicted RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 GRK7Q8WTQ7 553 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 RUBCNQ92622 972 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 SLC35C1Q96A29 364 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 DNAJC19Q96DA6 116 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 NUDCD1Q96RS6 583 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 POLR3CQ9BUI4 534 aaPredicted RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 MRPL4Q9BYD3 311 aaKnown RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 FAM129AQ9BZQ8 928 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 AKAP11Q9UKA4 1901 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 TXNDC9O14530 226 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 CREB3O43889 395 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 LDHAP00338 332 aaKnown RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 CYP2C8P10632 490 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 KRT10P13645 584 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 BRD2P25440 801 aaKnown RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 TARSP26639 723 aaKnown RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 PPM1FP49593 454 aaPredicted RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 CCNHP51946 323 aaPredicted RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 PPATQ06203 517 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 ALCAMQ13740 583 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 PLCB4Q15147 1175 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 THEMIS2Q5TEJ8 643 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 CHADLQ6NUI6 762 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 SPATA21Q7Z572 469 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 MAP7D3Q8IWC1 876 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 PYROXD1Q8WU10 500 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 ERP27Q96DN0 273 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 CFAP36Q96G28 342 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 MCEEQ96PE7 176 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 CYTH2Q99418 400 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 DNAJC18Q9H819 358 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 MYH15Q9Y2K3 1946 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 RASA4BC9J798 803 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 MCF2LO15068 1137 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 RASA4O43374 803 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 AP1G2O75843 785 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 RASSF9O75901 435 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 VTNP04004 478 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 INHBAP08476 426 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 C6orf222P0C671 652 aaPredicted RBP6.85□□□□□ -1.31
HMG20A-201ENST00000336216 DRD4P21917 467 aa6.85□□□□□ -1.31
HMG20A-201ENST00000336216 PSMC4P43686 418 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms