RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 AGAP1Q9UPQ3 857 aa23.16■■□□□ 1.3
TPM1-204ENST00000334895 FHOD1Q9Y613 1164 aa23.16■■□□□ 1.3
TPM1-204ENST00000334895 PIRO00625 290 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 XPOTO43592 962 aaKnown RBP23.15■■□□□ 1.3
TPM1-204ENST00000334895 UPP2O95045 317 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 UCHL3P15374 230 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 TRIM21P19474 475 aaKnown RBP23.15■■□□□ 1.3
TPM1-204ENST00000334895 LRPAP1P30533 357 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 FXR1P51114 621 aaKnown RBP eCLIP23.15■■□□□ 1.3
TPM1-204ENST00000334895 NAA15Q9BXJ9 866 aaKnown RBP23.15■■□□□ 1.3
TPM1-204ENST00000334895 TBC1D13Q9NVG8 400 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 NUB1Q9Y5A7 615 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.15■■□□□ 1.31e-6■■■□□ 19.1
TPM1-204ENST00000334895 ZC3H11AO75152 810 aaKnown RBP eCLIP23.15■■□□□ 1.3
TPM1-204ENST00000334895 AMHP03971 560 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 NOP14P78316 857 aaKnown RBP23.15■■□□□ 1.3
TPM1-204ENST00000334895 RBP5P82980 135 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 GOLGA8FQ08AF8 430 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 GOLGA8DPQ0D2H9 430 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 CCDC173Q0VFZ6 552 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 IQCEQ6IPM2 695 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 PSRC1Q6PGN9 363 aaPredicted RBP23.15■■□□□ 1.3
TPM1-204ENST00000334895 CPLX3Q8WVH0 158 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 KAT5Q92993 513 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 PAAF1Q9BRP4 392 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 NUP58Q9BVL2 599 aa23.15■■□□□ 1.3
TPM1-204ENST00000334895 CXXC1Q9P0U4 656 aaPredicted RBP23.15■■□□□ 1.3
TPM1-204ENST00000334895 HOXA2O43364 376 aa23.14■■□□□ 1.29
TPM1-204ENST00000334895 DDHD2O94830 711 aa23.14■■□□□ 1.29
TPM1-204ENST00000334895 IGFBP6P24592 240 aaPredicted RBP23.14■■□□□ 1.29
TPM1-204ENST00000334895 CASP14P31944 242 aa23.14■■□□□ 1.29
TPM1-204ENST00000334895 POLR2FP61218 127 aaKnown RBP23.14■■□□□ 1.29
TPM1-204ENST00000334895 DSC1Q08554 894 aa23.14■■□□□ 1.29
TPM1-204ENST00000334895 SGSM1Q2NKQ1 1148 aa23.14■■□□□ 1.29
TPM1-204ENST00000334895 ZNF280BQ86YH2 543 aa23.14■■□□□ 1.29
TPM1-204ENST00000334895 URGCPQ8TCY9 931 aa23.14■■□□□ 1.29
TPM1-204ENST00000334895 NT5C1BQ96P26 610 aa23.14■■□□□ 1.29
TPM1-204ENST00000334895 UBE2OQ9C0C9 1292 aaKnown RBP23.14■■□□□ 1.29
TPM1-204ENST00000334895 RNF216Q9NWF9 866 aaPredicted RBP23.14■■□□□ 1.29
TPM1-204ENST00000334895 IMPACTQ9P2X3 320 aa23.14■■□□□ 1.29
TPM1-204ENST00000334895 FBXL5Q9UKA1 691 aa23.14■■□□□ 1.29
TPM1-204ENST00000334895 CASTOR2A6NHX0 329 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 DGKIO75912 1065 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 TUSC3Q13454 348 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 TRIM14Q14142 442 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 ZNF699Q32M78 642 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 WDR44Q5JSH3 913 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 RRAGAQ7L523 313 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 ABI1Q8IZP0 508 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 BAP1Q92560 729 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 HPDLQ96IR7 371 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 KREMEN1Q96MU8 473 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 VRTNQ9H8Y1 702 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 RC3H2Q9HBD1 1191 aaKnown RBP23.13■■□□□ 1.29
TPM1-204ENST00000334895 NLRC4Q9NPP4 1024 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 CEP72Q9P209 647 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 HCSTQ9UBK5 93 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 CAPN11Q9UMQ6 739 aa23.13■■□□□ 1.29
TPM1-204ENST00000334895 A0A1W2PQJ5 194 aa23.12■■□□□ 1.29
TPM1-204ENST00000334895 STAU1O95793 577 aaKnown RBP23.12■■□□□ 1.29
TPM1-204ENST00000334895 CLCNKBP51801 687 aa23.12■■□□□ 1.29
TPM1-204ENST00000334895 LRRC52Q8N7C0 313 aa23.12■■□□□ 1.29
TPM1-204ENST00000334895 HERVK_113Q902F9 699 aa23.12■■□□□ 1.29
TPM1-204ENST00000334895 RABGGTAQ92696 567 aa23.12■■□□□ 1.29
TPM1-204ENST00000334895 KANSL3Q9P2N6 904 aa23.12■■□□□ 1.29
TPM1-204ENST00000334895 DNAJC12Q9UKB3 198 aa23.12■■□□□ 1.29
TPM1-204ENST00000334895 TBKBP1A7MCY6 615 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 ZBBXA8MT70 800 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 ATICP31939 592 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 KCNJ6P48051 423 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 ARID5BQ14865 1188 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 PPFIBP1Q86W92 1011 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 COLGALT2Q8IYK4 626 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 C3orf58Q8NDZ4 430 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 TAF4BQ92750 862 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 ARID3AQ99856 593 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 EDEM3Q9BZQ6 932 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 IMPG2Q9BZV3 1241 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 PRO3102Q9H379 93 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 UBE2TQ9NPD8 197 aaPredicted RBP23.11■■□□□ 1.29
TPM1-204ENST00000334895 TRIOBPQ9H2D6 2365 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 GBF1Q92538 1859 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 SPTLC1O15269 473 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 MFAP3LO75121 409 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 ADKP55263 362 aaKnown RBP23.11■■□□□ 1.29
TPM1-204ENST00000334895 UPP1Q16831 310 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 FAM117BQ6P1L5 589 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 CCDC186Q7Z3E2 898 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 PPM1KQ8N3J5 372 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 TC2NQ8N9U0 490 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 ZNF689Q96CS4 500 aaPredicted RBP23.11■■□□□ 1.29
TPM1-204ENST00000334895 IQCDQ96DY2 449 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 GPR88Q9GZN0 384 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 POLIQ9UNA4 740 aa23.11■■□□□ 1.29
TPM1-204ENST00000334895 COLQQ9Y215 455 aaPredicted RBP23.11■■□□□ 1.29
TPM1-204ENST00000334895 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.11■■□□□ 1.29
TPM1-204ENST00000334895 PODXLO00592 558 aa23.1■■□□□ 1.29
TPM1-204ENST00000334895 RPL9P32969 192 aaKnown RBP23.1■■□□□ 1.29
TPM1-204ENST00000334895 BMP8BP34820 402 aa23.1■■□□□ 1.29
TPM1-204ENST00000334895 ASPAP45381 313 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms