RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 MYO3BQ8WXR4 1341 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 TESPA1A2RU30 521 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 H2AFXP16104 143 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 RRM2P31350 389 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 NCKAP1LP55160 1127 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 KCNA1Q09470 495 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PTK6Q13882 451 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 NCAPHQ15003 741 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 TRIP13Q15645 432 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 OASLQ15646 514 aaKnown RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 TMEM63BQ5T3F8 832 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 UGT3A1Q6NUS8 523 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 TTC27Q6P3X3 843 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 MZT2AQ6P582 158 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 ULK2Q8IYT8 1036 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 ANKRD13CQ8N6S4 541 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 AP3S1Q92572 193 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CENPTQ96BT3 561 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CLIC6Q96NY7 704 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 UBXN6Q9BZV1 441 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 VPS11Q9H270 941 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SMARCAD1Q9H4L7 1026 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 USE1Q9NZ43 259 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CRNNQ9UBG3 495 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 ADAMTS1Q9UHI8 967 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 MBD5Q9P267 1494 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 ECDO95905 644 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 ATP1A1P05023 1023 aaKnown RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 NPR3P17342 541 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 IL12AP29459 219 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SESN2P58004 480 aaPredicted RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 VSNL1P62760 191 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PTK7Q13308 1070 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 METTL13Q8N6R0 699 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 RDH13Q8NBN7 331 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 GORASP1Q9BQQ3 440 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 STN1Q9H668 368 aaKnown RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PALD1Q9ULE6 856 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SNX24Q9Y343 169 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 NEXMIFQ5QGS0 1516 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SNRPAP09012 282 aaKnown RBP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 FGFR4P22455 802 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 NAB2Q15742 525 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 EFHC1Q5JVL4 640 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 FGD2Q7Z6J4 655 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 CCDC33Q8N5R6 958 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 GRPEL2Q8TAA5 225 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 DNAJC7Q99615 494 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 STON1Q9Y6Q2 735 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 H3BNX3 289 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PIK3R1P27986 724 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 MTA1Q13330 715 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 PALB2Q86YC2 1186 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 TBCKQ8TEA7 893 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 DCAF4Q8WV16 495 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 GPKOWQ92917 476 aaPredicted RBP eCLIP5.78□□□□□ -1.48
PTPRB-202ENST00000334414 TBC1D22BQ9NU19 505 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 DMTF1Q9Y222 760 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 TPRKBQ9Y3C4 175 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 SQORQ9Y6N5 450 aa5.78□□□□□ -1.48
PTPRB-202ENST00000334414 GUCY1B2O75343 617 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 SASH1O94885 1247 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 SLC34A1Q06495 639 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 RSRC2Q7L4I2 434 aaKnown RBP5.77□□□□□ -1.49
PTPRB-202ENST00000334414 NFATC2IPQ8NCF5 419 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 STK32AQ8WU08 396 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 LRRC4Q9HBW1 653 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 EURLQ9NYK6 297 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 POTEMA6NI47 508 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 GAS2O43903 313 aaKnown RBP5.77□□□□□ -1.49
PTPRB-202ENST00000334414 CNOT3O75175 753 aaKnown RBP5.77□□□□□ -1.49
PTPRB-202ENST00000334414 ADARP55265 1226 aaKnown RBP5.77□□□□□ -1.49
PTPRB-202ENST00000334414 PDZK1Q5T2W1 519 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 OTUD7BQ6GQQ9 843 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 POTEHQ6S545 545 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 POTEGQ6S5H5 508 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 CCDC149Q6ZUS6 474 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 FNIP1Q8TF40 1166 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 HSPH1Q92598 858 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 FAM193BQ96PV7 902 aaPredicted RBP5.77□□□□□ -1.49
PTPRB-202ENST00000334414 SH3GLB1Q9Y371 365 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 CD3EAPO15446 510 aaKnown RBP5.77□□□□□ -1.49
PTPRB-202ENST00000334414 MXD4Q14582 209 aaPredicted RBP5.77□□□□□ -1.49
PTPRB-202ENST00000334414 EDRF1Q3B7T1 1238 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 FASTKD1Q53R41 847 aaKnown RBP5.77□□□□□ -1.49
PTPRB-202ENST00000334414 TUBA3EQ6PEY2 450 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 OLFML1Q6UWY5 402 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 LPCAT2Q7L5N7 544 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 CCDC60Q8IWA6 550 aaPredicted RBP5.77□□□□□ -1.49
PTPRB-202ENST00000334414 DDX50Q9BQ39 737 aaKnown RBP5.77□□□□□ -1.49
PTPRB-202ENST00000334414 THTPAQ9BU02 230 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 RSAD1Q9HA92 442 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 TOPORSQ9NS56 1045 aaPredicted RBP5.77□□□□□ -1.49
PTPRB-202ENST00000334414 RAD54BQ9Y620 910 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 A0A087WXM4 84 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 COPB2P35606 906 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 TRAF3Q13114 568 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 ARMCX6Q7L4S7 300 aa5.77□□□□□ -1.49
PTPRB-202ENST00000334414 RPF1Q9H9Y2 349 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms