RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 WASHC2DQ5SRD0 308 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 FYB2Q5VWT5 728 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 C1orf186Q6ZWK4 172 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 CCDC125Q86Z20 511 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 C12orf50Q8NA57 414 aaPredicted RBP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 UCMAQ8WVF2 138 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 LENG9Q96B70 501 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 POLR3CQ9BUI4 534 aaPredicted RBP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 CHCHD3Q9NX63 227 aaKnown RBP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 R3HDM2Q9Y2K5 976 aaKnown RBP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 GZMAP12544 262 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 SKIP12755 728 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 ABCD1P33897 745 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 ROR2Q01974 943 aaKnown RBP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 PTK6Q13882 451 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 ZYXQ15942 572 aaKnown RBP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 ZNF568Q3ZCX4 644 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 KHDC1Q4VXA5 237 aaKnown RBP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 CWF19L1Q69YN2 538 aaKnown RBP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 MOXD1Q6UVY6 613 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 SCYL3Q8IZE3 742 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 VPS52Q8N1B4 723 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 CCDC89Q8N998 374 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 MAIP1Q8WWC4 291 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 MCUR1Q96AQ8 359 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 ELMO3Q96BJ8 720 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 CCDC127Q96BQ5 260 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 PRMT6Q96LA8 375 aaPredicted RBP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 MBOAT7Q96N66 472 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 NMRK1Q9NWW6 199 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 LGALS13Q9UHV8 139 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 GTF3C4Q9UKN8 822 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 YDJCA8MPS7 323 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 MAP3K13O43283 966 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 T-ENOLP0DO92 83 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 SP100P23497 879 aaPredicted RBP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 IVDP26440 423 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 CNGA1P29973 690 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 RPA3P35244 121 aaPredicted RBP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 MXI1P50539 228 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 ZRSR2Q15696 482 aaKnown RBP14.56□□□□□ -0.08
SYNE3-201ENST00000334258 Q4G0T1 1027 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 SNX30Q5VWJ9 437 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 NLRP9Q7RTR0 991 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 FBXO11Q86XK2 927 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 LMO3Q8TAP4 145 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 UVRAGQ9P2Y5 699 aa14.56□□□□□ -0.08
SYNE3-201ENST00000334258 CFAP69A5D8W1 941 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 ASMTLO95671 621 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 KRT5P13647 590 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 ACADSP16219 412 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 PTPN4P29074 926 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 UBXN2AP68543 259 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 PKN2Q16513 984 aaKnown RBP14.55□□□□□ -0.08
SYNE3-201ENST00000334258 TMEM63BQ5T3F8 832 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 DAB2IPQ5VWQ8 1189 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 MFN1Q8IWA4 741 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 LARGE2Q8N3Y3 721 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 STMN2Q93045 179 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 CFAP57Q96MR6 1250 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 DMAC2Q9NW81 257 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 VAV3Q9UKW4 847 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 A0A0G2JND7 137 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 ARHGEF35A5YM69 484 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 GOLGA8IPA6NC78 632 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 GOLGA8JA6NMD2 632 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 SLITRK3O94933 977 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 LMNAP02545 664 aaKnown RBP14.55□□□□□ -0.08
SYNE3-201ENST00000334258 EEF2P13639 858 aaKnown RBP14.55□□□□□ -0.08
SYNE3-201ENST00000334258 VHLP40337 213 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 GABPAQ06546 454 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 OVGP1Q12889 678 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 LAMB3Q13751 1172 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 EPC2Q52LR7 807 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 C2CD6Q53TS8 623 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 MFSD4BQ5TF39 518 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 RFWD3Q6PCD5 774 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 SYDE1Q6ZW31 735 aaPredicted RBP14.55□□□□□ -0.08
SYNE3-201ENST00000334258 PPFIBP2Q8ND30 876 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 DCLK3Q9C098 648 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 ACTL7BQ9Y614 415 aa14.55□□□□□ -0.08
SYNE3-201ENST00000334258 IGKV6D-41A0A0C4DH26 115 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 EDF1O60869 148 aaKnown RBP14.54□□□□□ -0.08
SYNE3-201ENST00000334258 TCEA3O75764 348 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 NPTXRO95502 500 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 HLA-DOAP06340 250 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 RALAP11233 206 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 PLS3P13797 630 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 PPP1R15BQ5SWA1 713 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 TRABD2AQ86V40 505 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 MYLK4Q86YV6 388 aaPredicted RBP14.54□□□□□ -0.08
SYNE3-201ENST00000334258 FLAD1Q8NFF5 587 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 PSPC1Q8WXF1 523 aaKnown RBP14.54□□□□□ -0.08
SYNE3-201ENST00000334258 FOSP01100 380 aaPredicted RBP14.54□□□□□ -0.08
SYNE3-201ENST00000334258 TROVE2P10155 538 aaKnown RBP eCLIP14.54□□□□□ -0.08
SYNE3-201ENST00000334258 FMO1Q01740 532 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 LBRQ14739 615 aaKnown RBP14.54□□□□□ -0.08
SYNE3-201ENST00000334258 P3H1Q32P28 736 aa14.54□□□□□ -0.08
SYNE3-201ENST00000334258 BBOF1Q8ND07 529 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms