RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 ZNF577Q9BSK1 485 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 NUP85Q9BW27 656 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 NFKBIZQ9BYH8 718 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 CCDC113Q9H0I3 377 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 PDZD7Q9H5P4 517 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 PCDH9Q9HC56 1237 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 AGAP1Q9UPQ3 857 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 UTRNP46939 3433 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 KBTBD13C9JR72 458 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 PDLIM1O00151 329 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 LIASO43766 372 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 CTNND1O60716 968 aaKnown RBP9.35□□□□□ -0.91
CPNE8-201ENST00000331366 EDF1O60869 148 aaKnown RBP9.35□□□□□ -0.91
CPNE8-201ENST00000331366 ZWINTO95229 277 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 RPL34P49207 117 aaKnown RBP9.35□□□□□ -0.91
CPNE8-201ENST00000331366 POLGP54098 1239 aaPredicted RBP9.35□□□□□ -0.91
CPNE8-201ENST00000331366 DLG4P78352 724 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 NBPF20Q3BBV1 942 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 FAM43BQ6ZT52 329 aaPredicted RBP9.35□□□□□ -0.91
CPNE8-201ENST00000331366 SPATA21Q7Z572 469 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 ZC3H12CQ9C0D7 883 aaKnown RBP9.35□□□□□ -0.91
CPNE8-201ENST00000331366 PLEKHA4Q9H4M7 779 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 TXLNGQ9NUQ3 528 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 RAB20Q9NX57 234 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 SAMD15Q9P1V8 674 aa9.35□□□□□ -0.91
CPNE8-201ENST00000331366 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.35□□□□□ -0.91
CPNE8-201ENST00000331366 SPAG6O75602 509 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 SGPL1O95470 568 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 KRT18P05783 430 aaKnown RBP9.34□□□□□ -0.91
CPNE8-201ENST00000331366 ACADSP16219 412 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 PROZP22891 400 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 ZNF280AP59817 542 aaPredicted RBP9.34□□□□□ -0.91
CPNE8-201ENST00000331366 IFI35P80217 286 aaPredicted RBP9.34□□□□□ -0.91
CPNE8-201ENST00000331366 DNAJC3Q13217 504 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 BLMHQ13867 455 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 ZC2HC1CQ53FD0 456 aaPredicted RBP9.34□□□□□ -0.91
CPNE8-201ENST00000331366 ODR4Q5SWX8 454 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 C4orf22Q6V702 233 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 RHOT1Q8IXI2 618 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 MCPH1Q8NEM0 835 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 RBM41Q96IZ5 413 aaKnown RBP9.34□□□□□ -0.91
CPNE8-201ENST00000331366 RAB3IPQ96QF0 476 aaPredicted RBP9.34□□□□□ -0.91
CPNE8-201ENST00000331366 VAT1LQ9HCJ6 419 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 RGL1Q9NZL6 768 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 ARP10275 920 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 MATR3P43243 847 aaKnown RBP eCLIP9.34□□□□□ -0.91
CPNE8-201ENST00000331366 MAGEA3P43357 314 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 MARCKSL1P49006 195 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 POU5F1BQ06416 359 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 HLTFQ14527 1009 aaKnown RBP eCLIP9.34□□□□□ -0.91
CPNE8-201ENST00000331366 SNRNP35Q16560 246 aaKnown RBP9.34□□□□□ -0.91
CPNE8-201ENST00000331366 HAUS6Q7Z4H7 955 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 KLHDC8BQ8IXV7 354 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 VPS11Q9H270 941 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 MRPL47Q9HD33 250 aaKnown RBP9.34□□□□□ -0.91
CPNE8-201ENST00000331366 ATP8A1Q9Y2Q0 1164 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 SNCAIPQ9Y6H5 919 aa9.34□□□□□ -0.91
CPNE8-201ENST00000331366 TMEM191CA6NGB0 347 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 TMEM191BP0C7N4 346 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 MMP8P22894 467 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 ARL2P36404 184 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 ECE1P42892 770 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 NEK3P51956 506 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 PGM5Q15124 567 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 TARBP2Q15633 366 aaKnown RBP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 DCAF17Q5H9S7 520 aaPredicted RBP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 IFNLR1Q8IU57 520 aaPredicted RBP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 ABRAQ8N0Z2 381 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 GPD1LQ8N335 351 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 ZFAND2BQ8WV99 257 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 UTP4Q969X6 686 aaKnown RBP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 FAM136AQ96C01 138 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 PTCD3Q96EY7 689 aaKnown RBP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 STN1Q9H668 368 aaKnown RBP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 TRPC5Q9UL62 973 aaPredicted RBP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 MAFBQ9Y5Q3 323 aaPredicted RBP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 ARHGEF35A5YM69 484 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 GAS2O43903 313 aaKnown RBP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 SMNDC1O75940 238 aaKnown RBP eCLIP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 LUC7L3O95232 432 aaKnown RBP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 GAS8O95995 478 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 SCNN1AP37088 669 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 RAP1GDS1P52306 607 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 KRT17Q04695 432 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 MPP2Q14168 576 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 NOL9Q5SY16 702 aaKnown RBP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 PLA2G4FQ68DD2 849 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 ILDR2Q71H61 639 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 CYP2W1Q8TAV3 490 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 NT5C1BQ96P26 610 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 CGRRF1Q99675 332 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 C1orf21Q9H246 121 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 KCNH7Q9NS40 1196 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 COL20A1Q9P218 1284 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 LTBP3Q9NS15 1303 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 WDR64B1ANS9 1081 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 LDHAP00338 332 aaKnown RBP9.33□□□□□ -0.92
CPNE8-201ENST00000331366 KCNA2P16389 499 aa9.33□□□□□ -0.92
CPNE8-201ENST00000331366 ETV4P43268 484 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms