RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 PLAGL2Q9UPG8 496 aa16.97■□□□□ 0.31
PDGFB-201ENST00000331163 MYH9P35579 1960 aaKnown RBP16.97■□□□□ 0.31
PDGFB-201ENST00000331163 DUSP11O75319 330 aaKnown RBP16.97■□□□□ 0.31
PDGFB-201ENST00000331163 DAB2IPQ5VWQ8 1189 aa16.97■□□□□ 0.31
PDGFB-201ENST00000331163 DSTYKQ6XUX3 929 aa16.97■□□□□ 0.31
PDGFB-201ENST00000331163 UBXN6Q9BZV1 441 aa16.97■□□□□ 0.31
PDGFB-201ENST00000331163 KLHL11Q9NVR0 708 aa16.97■□□□□ 0.31
PDGFB-201ENST00000331163 GJD2Q9UKL4 321 aa16.97■□□□□ 0.31
PDGFB-201ENST00000331163 L1RE1Q9UN81 338 aa16.97■□□□□ 0.31
PDGFB-201ENST00000331163 DLEC1Q9Y238 1755 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 HTTP42858 3142 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 ASAP2O43150 1006 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 PALMO75781 387 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 HMGCRP04035 888 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 PAK2Q13177 524 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 MORN1Q5T089 497 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 PALB2Q86YC2 1186 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 TMEM40Q8WWA1 233 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 SCLYQ96I15 445 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 ADAM2Q99965 735 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 UNC93B1Q9H1C4 597 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 ST3GAL5Q9UNP4 418 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 MEIS3P2A8K0S8 358 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 LRFN2Q9ULH4 789 aa16.96■□□□□ 0.31
PDGFB-201ENST00000331163 B3GAT3O94766 335 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 STBD1O95210 358 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 MLH1P40692 756 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 CAP1Q01518 475 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 PLCB3Q01970 1234 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 CYP4A22Q5TCH4 519 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 KAZNQ674X7 775 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 PPM1EQ8WY54 764 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 HPDLQ96IR7 371 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 MKNK1Q9BUB5 465 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 KIAA1586Q9HCI6 787 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 SLC45A1Q9Y2W3 748 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 PTPRJQ12913 1337 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 C2CD2LO14523 706 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 MAP2K7O14733 419 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 NOL4O94818 638 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 ATG7O95352 703 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 GTF2H1P32780 548 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 VPS41P49754 854 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.95■□□□□ 0.3
PDGFB-201ENST00000331163 RBBP8NLQ8NC74 664 aaPredicted RBP16.95■□□□□ 0.3
PDGFB-201ENST00000331163 OSGEPQ9NPF4 335 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 NOC2LQ9Y3T9 749 aaKnown RBP16.95■□□□□ 0.3
PDGFB-201ENST00000331163 GARTP22102 1010 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 PBX3P40426 434 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 GALCP54803 685 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 ACSF2Q96CM8 615 aaPredicted RBP16.95■□□□□ 0.3
PDGFB-201ENST00000331163 HAPLN2Q9GZV7 340 aa16.95■□□□□ 0.3
PDGFB-201ENST00000331163 RASSF10A6NK89 507 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 A8MXQ7 604 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 F8VZ95 297 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 SLC26A4O43511 780 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 MSCO60682 206 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 PSMC1P62191 440 aaKnown RBP16.94■□□□□ 0.3
PDGFB-201ENST00000331163 SNX17Q15036 470 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 APBB1IPQ7Z5R6 666 aaPredicted RBP16.94■□□□□ 0.3
PDGFB-201ENST00000331163 STK33Q9BYT3 514 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 FAM107BQ9H098 131 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 CAPN6Q9Y6Q1 641 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 ARFGEF1Q9Y6D6 1849 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 DOCK5Q9H7D0 1870 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 A0A0B4J269 797 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 ATP1A1P05023 1023 aaKnown RBP16.94■□□□□ 0.3
PDGFB-201ENST00000331163 PURAQ00577 322 aaKnown RBP16.94■□□□□ 0.3
PDGFB-201ENST00000331163 ACOT1Q86TX2 421 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 KAT2BQ92831 832 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 MS4A14Q96JA4 679 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 NUCKS1Q9H1E3 243 aaKnown RBP16.94■□□□□ 0.3
PDGFB-201ENST00000331163 CENPHQ9H3R5 247 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 DPP3Q9NY33 737 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 LAMA3Q16787 3333 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 A6NJR5 290 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 NT5C1B-RDH14C9J2C7 533 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 VAV2P52735 878 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 HLTFQ14527 1009 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDGFB-201ENST00000331163 PCSK9Q8NBP7 692 aaKnown RBP16.94■□□□□ 0.3
PDGFB-201ENST00000331163 ZNF516Q92618 1163 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 LPIN3Q9BQK8 851 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 MYO6Q9UM54 1294 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 DOCK1Q14185 1865 aa16.94■□□□□ 0.3
PDGFB-201ENST00000331163 CLTAP09496 248 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 SCNN1GP51170 649 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 RABGGTBP53611 331 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 MBTD1Q05BQ5 628 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 MYO1EQ12965 1108 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 CCDC70Q6NSX1 233 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 TEX2Q8IWB9 1127 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 FAM71BQ8TC56 605 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 FAM118BQ9BPY3 351 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 SNX25Q9H3E2 840 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 IFT122Q9HBG6 1241 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 BRCA1P38398 1863 aaKnown RBP16.93■□□□□ 0.3
PDGFB-201ENST00000331163 ITIH6Q6UXX5 1313 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 PASKQ96RG2 1323 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 PBX1P40424 430 aa16.93■□□□□ 0.3
PDGFB-201ENST00000331163 TARBP2Q15633 366 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms