RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 KIAA1683Q9H0B3 1180 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 ABCF3Q9NUQ8 709 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 NINJ2Q9NZG7 142 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 USP15Q9Y4E8 981 aaPredicted RBP16.34■□□□□ 0.21
BRCC3-201ENST00000330045 TCEA3O75764 348 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 OAS1P00973 400 aaKnown RBP16.34■□□□□ 0.21
BRCC3-201ENST00000330045 CYP1A1P04798 512 aaPredicted RBP16.34■□□□□ 0.21
BRCC3-201ENST00000330045 MAP2K2P36507 400 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 KLF1Q13351 362 aaPredicted RBP16.34■□□□□ 0.21
BRCC3-201ENST00000330045 PREPLQ4J6C6 727 aaPredicted RBP16.34■□□□□ 0.21
BRCC3-201ENST00000330045 DAB2IPQ5VWQ8 1189 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 LMBRD2Q68DH5 695 aaPredicted RBP16.34■□□□□ 0.21
BRCC3-201ENST00000330045 ANKRD42Q8N9B4 389 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 PWWP2AQ96N64 755 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 SENP7Q9BQF6 1050 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 FGFR1OP2Q9NVK5 253 aa16.34■□□□□ 0.21
BRCC3-201ENST00000330045 CCNG2Q16589 344 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 NUGGCQ68CJ6 796 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 ZNF365Q70YC5 407 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 MON1BQ7L1V2 547 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 RHOT1Q8IXI2 618 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 MCPH1Q8NEM0 835 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 ATP6V0A1Q93050 837 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 FNBP1Q96RU3 617 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 WRNIP1Q96S55 665 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 NEU2Q9Y3R4 380 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 POLR2AP24928 1970 aaKnown RBP16.33■□□□□ 0.2
BRCC3-201ENST00000330045 ARID2Q68CP9 1835 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 FOXO6A8MYZ6 492 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 PSTPIP1O43586 416 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 ZBED4O75132 1171 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 DGAT1O75907 488 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 STBD1O95210 358 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 BRAFP15056 766 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 TNNI1P19237 187 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 WLSQ5T9L3 541 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 LIN9Q5TKA1 542 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 TAS1R3Q7RTX0 852 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 CCDC89Q8N998 374 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 BBOF1Q8ND07 529 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 CKAP2Q8WWK9 683 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 IFT74Q96LB3 600 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 SYT17Q9BSW7 474 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 MLXIPLQ9NP71 852 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 PDLIM7Q9NR12 457 aa16.33■□□□□ 0.2
BRCC3-201ENST00000330045 UMODL1Q5DID0 1318 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 SSC5DA1L4H1 1573 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 O00370 1275 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 EXTL3O43909 919 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 DKC1O60832 514 aaKnown RBP eCLIP16.32■□□□□ 0.2
BRCC3-201ENST00000330045 SUN1O94901 812 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 HLA-DRAP01903 254 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 ZACNQ401N2 412 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 SWSAP1Q6NVH7 229 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 VSIG10LQ86VR7 867 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 CEP57Q86XR8 500 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.32■□□□□ 0.2
BRCC3-201ENST00000330045 KIAA1586Q9HCI6 787 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 XPNPEP1Q9NQW7 623 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 SBF1O95248 1867 aa16.32■□□□□ 0.2
BRCC3-201ENST00000330045 CFAP73A6NFT4 308 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 CCND2P30279 289 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 PIK3CAP42336 1068 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 LIG4P49917 911 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 RTP1P59025 263 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 CLDN10P78369 228 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
BRCC3-201ENST00000330045 PSMD6Q15008 389 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 SPOPLQ6IQ16 392 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 XRRA1Q6P2D8 792 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 CYP4X1Q8N118 509 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 GPC2Q8N158 579 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 GPRASP2Q96D09 838 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 FAM118BQ9BPY3 351 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 C11orf70Q9BRQ4 267 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 OSBPL8Q9BZF1 889 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 MRPL47Q9HD33 250 aaKnown RBP16.31■□□□□ 0.2
BRCC3-201ENST00000330045 RNF181Q9P0P0 153 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 ARHGAP28Q9P2N2 729 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 MAFGO15525 162 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 UBOX5O94941 541 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 ATP6V1G2O95670 118 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 C4BPAP04003 597 aaKnown RBP16.31■□□□□ 0.2
BRCC3-201ENST00000330045 NR3C2P08235 984 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 SLC8A1P32418 973 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 TAS2R40P59535 323 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 MPP2Q14168 576 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 TDRD10Q5VZ19 366 aaKnown RBP16.31■□□□□ 0.2
BRCC3-201ENST00000330045 IZUMO3Q5VZ72 239 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 GDAP1Q8TB36 358 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 MYCBPQ99417 103 aaPredicted RBP16.31■□□□□ 0.2
BRCC3-201ENST00000330045 CCDC77Q9BR77 488 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 ADAM22Q9P0K1 906 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 TBK1Q9UHD2 729 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 SEPT9Q9UHD8 586 aaPredicted RBP16.31■□□□□ 0.2
BRCC3-201ENST00000330045 LGALS13Q9UHV8 139 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 GGT7Q9UJ14 662 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 NAALADL1Q9UQQ1 740 aa16.31■□□□□ 0.2
BRCC3-201ENST00000330045 PCNTO95613 3336 aa16.3■□□□□ 0.2
BRCC3-201ENST00000330045 CDH16O75309 829 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms