RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 SEZ6Q53EL9 994 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 INTS8Q75QN2 995 aaKnown RBP17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 FMNL3Q8IVF7 1028 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 FAM186BQ8IYM0 893 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 DNAJC7Q99615 494 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 CDT1Q9H211 546 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 KIAA1586Q9HCI6 787 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 SPG21Q9NZD8 308 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 GIT1Q9Y2X7 761 aa17.78■□□□□ 0.44
PDLIM1-201ENST00000329399 NCOR1O75376 2440 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 PTGESO14684 152 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 RECQL4O94761 1208 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 GARTP22102 1010 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 KRT9P35527 623 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 OSTNP61366 133 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 RBM10P98175 930 aaKnown RBP17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 CDK17Q00537 523 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 PLCB3Q01970 1234 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 HYAL1Q12794 435 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 PTPROQ16827 1216 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 CYP26C1Q6V0L0 522 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 COLGALT2Q8IYK4 626 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 TMEM130Q8N3G9 435 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 XXYLT1Q8NBI6 393 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 NEK11Q8NG66 645 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 PCMTD1Q96MG8 357 aaPredicted RBP17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 PAAF1Q9BRP4 392 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 MRPL9Q9BYD2 267 aaKnown RBP17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 MRPL4Q9BYD3 311 aaKnown RBP17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 RRAGDQ9NQL2 400 aaPredicted RBP17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 AAASQ9NRG9 546 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 SIK3Q9Y2K2 1263 aa17.77■□□□□ 0.44
PDLIM1-201ENST00000329399 BDP1A6H8Y1 2624 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 HIDE1A8MVS5 230 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 TISP43B9A030 160 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 PMM2O15305 246 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 P4HA2O15460 535 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 LINC01565O15544 149 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 EXOC3O60645 756 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 N4BP1O75113 896 aaKnown RBP17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 AKAP3O75969 853 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 KRT13P13646 458 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 ALDH7A1P49419 539 aaKnown RBP17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 ADKP55263 362 aaKnown RBP17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 DSC1Q08554 894 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 KCNA1Q09470 495 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 KCNH2Q12809 1159 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 STRN3Q13033 797 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 CEP135Q66GS9 1140 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 SLFN12LQ6IEE8 588 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 SLC39A4Q6P5W5 647 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 RBM23Q86U06 439 aaKnown RBP17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 EEF2KMTQ96G04 330 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 BORCS6Q96GS4 357 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 TTYH3Q9C0H2 523 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 LMAN2LQ9H0V9 348 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 PLCB1Q9NQ66 1216 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 ABHD10Q9NUJ1 306 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 FBXL5Q9UKA1 691 aa17.76■□□□□ 0.43
PDLIM1-201ENST00000329399 NRP1O14786 923 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 FSCN2O14926 492 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 PER2O15055 1255 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 CLIC2O15247 247 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 PIGRP01833 764 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 HNRNPH3P31942 346 aaKnown RBP17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 DLX2Q07687 328 aaPredicted RBP17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 CETN1Q12798 172 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 NAB2Q15742 525 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 TAS1R1Q7RTX1 841 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 TMEM139Q8IV31 216 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 URGCPQ8TCY9 931 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 AUTS2Q8WXX7 1259 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 SYN2Q92777 582 aaPredicted RBP17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 IGSF21Q96ID5 467 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 NSUN3Q9H649 340 aaKnown RBP17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 IGFLR1Q9H665 355 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 UBN1Q9NPG3 1134 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 MYO6Q9UM54 1294 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 TRIP11Q15643 1979 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 TTC26A0AVF1 554 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 ANKRD63C9JTQ0 380 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 HARSP12081 509 aaKnown RBP17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 LTBRP36941 435 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 ZNF568Q3ZCX4 644 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 ZBTB41Q5SVQ8 909 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 GBP6Q6ZN66 633 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 ADPGKQ9BRR6 497 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 TLR9Q9NR96 1032 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 MARCH5Q9NX47 278 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 CEP72Q9P209 647 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 KANSL3Q9P2N6 904 aa17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 PRG3Q9Y2Y8 225 aaPredicted RBP17.75■□□□□ 0.43
PDLIM1-201ENST00000329399 LDHAP00338 332 aaKnown RBP17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 ALDH2P05091 517 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 KCNQ1P51787 676 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 COL19A1Q14993 1142 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 MEA1Q16626 185 aa17.74■□□□□ 0.43
PDLIM1-201ENST00000329399 DCAF4L1Q3SXM0 396 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms