RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 DRP2Q13474 957 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 CYB5D1Q6P9G0 228 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 TAB3Q8N5C8 712 aaPredicted RBP14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 NSUN6Q8TEA1 469 aaKnown RBP14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 FBXL18Q96ME1 805 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 NSRP1Q9H0G5 558 aaKnown RBP14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 WHRNQ9P202 907 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 UMODL1Q5DID0 1318 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 BRAFP15056 766 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 SCARA3Q6AZY7 606 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 FUKQ8N0W3 1084 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 ATL2Q8NHH9 583 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 TCP11Q8WWU5 503 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 OSBPL8Q9BZF1 889 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 PGAP2Q9UHJ9 254 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 HACL1Q9UJ83 578 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 EXTL3O43909 919 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 PEX10O60683 326 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 TTC4O95801 387 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 GH1P01241 217 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 E2F5Q15329 346 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 IZUMO3Q5VZ72 239 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 ENOSF1Q7L5Y1 443 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 TBC1D1Q86TI0 1168 aaPredicted RBP14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 SAMD3Q8N6K7 520 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 GPATCH11Q8N954 259 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 GRK7Q8WTQ7 553 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 THOC1Q96FV9 657 aaKnown RBP14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 DDX27Q96GQ7 796 aaKnown RBP14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 NTPCRQ9BSD7 190 aaKnown RBP14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 MSTO1Q9BUK6 570 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 RGS20O76081 388 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 CLTAP09496 248 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 KCNA2P16389 499 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 GARTP22102 1010 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 GTF2H1P32780 548 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 GMPSP49915 693 aaPredicted RBP14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 PLCB3Q01970 1234 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 EMC2Q15006 297 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 GNPTABQ3T906 1256 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 ZBTB33Q86T24 672 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 ABCF3Q9NUQ8 709 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 BAIAP2L1Q9UHR4 511 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 ZNF148Q9UQR1 794 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 TP73O15350 636 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 RASSF9O75901 435 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 PROSCO94903 275 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 BPIFB4P59827 614 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 RHOT1Q8IXI2 618 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 C12orf50Q8NA57 414 aaPredicted RBP14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 RBBP8NLQ8NC74 664 aaPredicted RBP14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 MAIP1Q8WWC4 291 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 ZNF668Q96K58 619 aaPredicted RBP14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 APOBEC3GQ9HC16 384 aaKnown RBP14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 GINM1Q9NU53 330 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 FBXO40Q9UH90 709 aa14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.93□□□□□ -0.02
ATP2C1-201ENST00000328560 ZSCAN5DPP0CG00 497 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 CUL2Q13617 745 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 ZACNQ401N2 412 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 PARP9Q8IXQ6 854 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 CYP4X1Q8N118 509 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 ZNF280CQ8ND82 737 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 OR5B17Q8NGF7 314 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 GPRASP2Q96D09 838 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 TEPSINQ96N21 525 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 NINJ2Q9NZG7 142 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 IFNB1P01574 187 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 TCF4P15884 667 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 RPS12P25398 132 aaKnown RBP14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 STX2P32856 288 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 BACE1P56817 501 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 RPL7AP62424 266 aaKnown RBP14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 TMED2Q15363 201 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 ASAP3Q8TDY4 903 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 ZNF526Q8TF50 670 aaPredicted RBP14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 TRAIPQ9BWF2 469 aa14.92□□□□□ -0.02
ATP2C1-201ENST00000328560 KCNA3P22001 575 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 IVDP26440 423 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 SLC1A1P43005 524 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 PLCB4Q15147 1175 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 SNCBQ16143 134 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 P3H1Q32P28 736 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 TRPM8Q7Z2W7 1104 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 ANKS1BQ7Z6G8 1248 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 TMEM174Q8WUU8 243 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 TRIM11Q96F44 468 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 CDHR1Q96JP9 859 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 FAM81BQ96LP2 452 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 ROPN1BQ9BZX4 212 aaPredicted RBP14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 C17orf75Q9HAS0 396 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 ROPN1Q9HAT0 212 aaPredicted RBP14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 RBBP6Q7Z6E9 1792 aaKnown RBP14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 COL4A5P29400 1685 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 ZNF541Q9H0D2 1346 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 POC1B-GALNT4F8VUJ3 575 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 ASAP2O43150 1006 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 VNN1O95497 513 aa14.91□□□□□ -0.02
ATP2C1-201ENST00000328560 MAMLD1Q13495 774 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms