RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 ITGB3P05106 788 aa28.27■■■□□ 2.12
TM6SF1-202ENST00000322019 PRKAR2AP13861 404 aaKnown RBP28.27■■■□□ 2.12
TM6SF1-202ENST00000322019 TBXAS1P24557 533 aaPredicted RBP28.27■■■□□ 2.12
TM6SF1-202ENST00000322019 SGSM1Q2NKQ1 1148 aa28.27■■■□□ 2.12
TM6SF1-202ENST00000322019 FAM81BQ96LP2 452 aa28.27■■■□□ 2.12
TM6SF1-202ENST00000322019 RNF216Q9NWF9 866 aaPredicted RBP28.27■■■□□ 2.12
TM6SF1-202ENST00000322019 PCDHB2Q9Y5E7 798 aa28.27■■■□□ 2.12
TM6SF1-202ENST00000322019 BUB1BO60566 1050 aaPredicted RBP28.26■■■□□ 2.11
TM6SF1-202ENST00000322019 RARBP10826 455 aa28.26■■■□□ 2.11
TM6SF1-202ENST00000322019 EIF4BP23588 611 aaKnown RBP28.26■■■□□ 2.11
TM6SF1-202ENST00000322019 HTRA3P83110 453 aa28.26■■■□□ 2.11
TM6SF1-202ENST00000322019 SNX17Q15036 470 aa28.26■■■□□ 2.11
TM6SF1-202ENST00000322019 NBPF20Q3BBV1 942 aa28.26■■■□□ 2.11
TM6SF1-202ENST00000322019 FBXO38Q6PIJ6 1188 aa28.26■■■□□ 2.11
TM6SF1-202ENST00000322019 DAAM2Q86T65 1068 aa28.26■■■□□ 2.11
TM6SF1-202ENST00000322019 PASD1Q8IV76 773 aa28.26■■■□□ 2.11
TM6SF1-202ENST00000322019 CD99L2Q8TCZ2 262 aa28.26■■■□□ 2.11
TM6SF1-202ENST00000322019 RAP1GAPP47736 663 aa28.25■■■□□ 2.11
TM6SF1-202ENST00000322019 ACAP3Q96P50 834 aa28.25■■■□□ 2.11
TM6SF1-202ENST00000322019 NIF3L1Q9GZT8 377 aa28.25■■■□□ 2.11
TM6SF1-202ENST00000322019 SNTG2Q9NY99 539 aa28.25■■■□□ 2.11
TM6SF1-202ENST00000322019 HOXC8P31273 242 aa28.25■■■□□ 2.11
TM6SF1-202ENST00000322019 C2CD6Q53TS8 623 aa28.25■■■□□ 2.11
TM6SF1-202ENST00000322019 CPA5Q8WXQ8 436 aa28.25■■■□□ 2.11
TM6SF1-202ENST00000322019 MTG1Q9BT17 334 aaPredicted RBP28.25■■■□□ 2.11
TM6SF1-202ENST00000322019 MROH7Q68CQ1 1323 aa28.25■■■□□ 2.11
TM6SF1-202ENST00000322019 GNA15P30679 374 aa28.24■■■□□ 2.11
TM6SF1-202ENST00000322019 ASPAP45381 313 aa28.24■■■□□ 2.11
TM6SF1-202ENST00000322019 IFI16Q16666 785 aaKnown RBP28.24■■■□□ 2.11
TM6SF1-202ENST00000322019 XPNPEP3Q9NQH7 507 aa28.24■■■□□ 2.11
TM6SF1-202ENST00000322019 CISHQ9NSE2 258 aa28.24■■■□□ 2.11
TM6SF1-202ENST00000322019 RHOXF2BP0C7M4 288 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 GZMAP12544 262 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 CLEC16AQ2KHT3 1053 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 FAM47CQ5HY64 1035 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 SLC27A1Q6PCB7 646 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 PHLDB2Q86SQ0 1253 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 UBR7Q8N806 425 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 CXorf38Q8TB03 319 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 WNT8BQ93098 351 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 RHOXF2Q9BQY4 288 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 NXF3Q9H4D5 531 aaKnown RBP28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 CREBZFQ9NS37 354 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 CTTNBP2NLQ9P2B4 639 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 PIN4Q9Y237 131 aaKnown RBP28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 ADAMTS4O75173 837 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 TCP1P17987 556 aaKnown RBP28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 GPC5P78333 572 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 C2orf54Q08AI8 447 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 TMEM132DQ14C87 1099 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 GDF6Q6KF10 455 aaPredicted RBP28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 APOL6Q9BWW8 343 aa28.23■■■□□ 2.11
TM6SF1-202ENST00000322019 PRLRP16471 622 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 GRM5P41594 1212 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 RNASE9P60153 205 aaKnown RBP28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 WDR72Q3MJ13 1102 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 NOTUMQ6P988 496 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 CYFIP2Q96F07 1278 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 UPF3AQ9H1J1 476 aaKnown RBP28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 CNTN6Q9UQ52 1028 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 CDH8P55286 799 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 CDC42EP1Q00587 391 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 NAA35Q5VZE5 725 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 LLGL2Q6P1M3 1020 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 RABGGTAQ92696 567 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 ASB7Q9H672 318 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 SPC25Q9HBM1 224 aa28.22■■■□□ 2.11
TM6SF1-202ENST00000322019 THAP12O43422 761 aa28.21■■■□□ 2.11
TM6SF1-202ENST00000322019 AKAP5P24588 427 aa28.21■■■□□ 2.11
TM6SF1-202ENST00000322019 POLR2BP30876 1174 aaKnown RBP28.21■■■□□ 2.11
TM6SF1-202ENST00000322019 DCAF4L1Q3SXM0 396 aa28.21■■■□□ 2.11
TM6SF1-202ENST00000322019 PEX26Q7Z412 305 aa28.21■■■□□ 2.11
TM6SF1-202ENST00000322019 SLFN11Q7Z7L1 901 aa28.21■■■□□ 2.11
TM6SF1-202ENST00000322019 ZNF653Q96CK0 615 aa28.21■■■□□ 2.11
TM6SF1-202ENST00000322019 KIF12Q96FN5 646 aa28.21■■■□□ 2.11
TM6SF1-202ENST00000322019 ZMAT2Q96NC0 199 aaKnown RBP28.21■■■□□ 2.11
TM6SF1-202ENST00000322019 ANKZF1Q9H8Y5 726 aa28.21■■■□□ 2.11
TM6SF1-202ENST00000322019 GTF2IRD1Q9UHL9 959 aa28.21■■■□□ 2.11
TM6SF1-202ENST00000322019 KIF4AO95239 1232 aa28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 ASGR1P07306 291 aa28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 GNAT1P11488 350 aa28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 UNGP13051 313 aaPredicted RBP28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 ZNF132P52740 706 aa28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 ORC1Q13415 861 aa28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 RPS6KA1Q15418 735 aa28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 GLRA4Q5JXX5 417 aa28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 ACAD10Q6JQN1 1059 aa28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 NT5DC3Q86UY8 548 aa28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 BTBD6Q96KE9 485 aa28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 TSKSQ9UJT2 592 aa28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 SCN10AQ9Y5Y9 1956 aa28.2■■■□□ 2.11
TM6SF1-202ENST00000322019 CITO14578 2027 aa28.2■■■□□ 2.1
TM6SF1-202ENST00000322019 KCNK3O14649 394 aa28.2■■■□□ 2.1
TM6SF1-202ENST00000322019 BPIFB4P59827 614 aa28.2■■■□□ 2.1
TM6SF1-202ENST00000322019 CKAP4Q07065 602 aaKnown RBP28.2■■■□□ 2.1
TM6SF1-202ENST00000322019 KCNA10Q16322 511 aa28.2■■■□□ 2.1
TM6SF1-202ENST00000322019 TRIM6Q9C030 488 aaPredicted RBP28.2■■■□□ 2.1
TM6SF1-202ENST00000322019 SMYD3Q9H7B4 428 aa28.2■■■□□ 2.1
TM6SF1-202ENST00000322019 TRIP11Q15643 1979 aa28.2■■■□□ 2.1
TM6SF1-202ENST00000322019 TMEM110-MUSTN1A8MSY1 372 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms