RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
DNMT3A-202ENST00000321117 NUP188Q5SRE5 1749 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 ASNSP08243 561 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 KRT4P19013 534 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 PDE1BQ01064 536 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 PPP3CAQ08209 521 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 NFX1Q12986 1120 aaKnown RBP13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 MTM1Q13496 603 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 CCNG2Q16589 344 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 C1orf146Q5VVC0 180 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 C6orf89Q6UWU4 347 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 HSPH1Q92598 858 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 RAVER2Q9HCJ3 691 aaKnown RBP13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 ACP6Q9NPH0 428 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 PICK1Q9NRD5 415 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 ZFATQ9P243 1243 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 SLC9A2Q9UBY0 812 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 AGO2Q9UKV8 859 aaKnown RBP13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 PNMA3Q9UL41 463 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 ECE2O60344 883 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 SNHG28P0DPA3 235 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 ERFP50548 548 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 JAM2P57087 298 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 ZBTB33Q86T24 672 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 ZNF677Q86XU0 584 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 KIFC3Q9BVG8 833 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 RBAKQ9NYW8 714 aaPredicted RBP13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 DLGAP2Q9P1A6 1054 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 PCSK1NQ9UHG2 260 aa13.46□□□□□ -0.25
DNMT3A-202ENST00000321117 KRT7P08729 469 aa13.46□□□□□ -0.26
DNMT3A-202ENST00000321117 CCND2P30279 289 aa13.46□□□□□ -0.26
DNMT3A-202ENST00000321117 CDC25CP30307 473 aa13.46□□□□□ -0.26
DNMT3A-202ENST00000321117 CTCFP49711 727 aaPredicted RBP13.46□□□□□ -0.26
DNMT3A-202ENST00000321117 OVGP1Q12889 678 aa13.46□□□□□ -0.26
DNMT3A-202ENST00000321117 ACCSLQ4AC99 568 aa13.46□□□□□ -0.26
DNMT3A-202ENST00000321117 C3orf62Q6ZUJ4 267 aa13.46□□□□□ -0.26
DNMT3A-202ENST00000321117 RANBP17Q9H2T7 1088 aaKnown RBP13.46□□□□□ -0.26
DNMT3A-202ENST00000321117 KIF9Q9HAQ2 790 aa13.46□□□□□ -0.26
DNMT3A-202ENST00000321117 AFF2P51816 1311 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 PSTPIP1O43586 416 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 MGRN1O60291 552 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 HLA-DRAP01903 254 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 P4HA1P13674 534 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 DLG4P78352 724 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 BIRC2Q13490 618 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 MIS18BP1Q6P0N0 1132 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 CDKL2Q92772 493 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 CDHR1Q96JP9 859 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 TMEM237Q96Q45 408 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 ZHX2Q9Y6X8 837 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 DDTLA6NHG4 134 aaPredicted RBP13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 H0YGN5 161 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 NOP56O00567 594 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 PPP1R12AO14974 1030 aaPredicted RBP13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 MED7O43513 233 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 KITP10721 976 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 ACOT2P49753 483 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 SNX16P57768 344 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 RIPK1Q13546 671 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 MTFR1Q15390 333 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 SPATA24Q86W54 205 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 WDR75Q8IWA0 830 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 RBBP8NLQ8NC74 664 aaPredicted RBP13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 NDE1Q9NXR1 346 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 TBX20Q9UMR3 447 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 NFS1Q9Y697 457 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 TISP43B9A030 160 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 KRT38O76015 456 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 PROSCO94903 275 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 ZBED1O96006 694 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 KRT16P08779 473 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 KRT10P13645 584 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 CIITAP33076 1130 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 GSCP56915 257 aaPredicted RBP13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 NOP14P78316 857 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 SATB1Q01826 763 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 PPATQ06203 517 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 PALB2Q86YC2 1186 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 CNKSR1Q969H4 720 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 MIS12Q9H081 205 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 DCLRE1BQ9H816 532 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 IFT122Q9HBG6 1241 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 NRBP2Q9NSY0 501 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 STXBP5LQ9Y2K9 1186 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 PCDHA10Q9Y5I2 948 aa13.45□□□□□ -0.26
DNMT3A-202ENST00000321117 VHLP40337 213 aa13.44□□□□□ -0.26
DNMT3A-202ENST00000321117 PTK6Q13882 451 aa13.44□□□□□ -0.26
DNMT3A-202ENST00000321117 CLEC16AQ2KHT3 1053 aa13.44□□□□□ -0.26
DNMT3A-202ENST00000321117 SWSAP1Q6NVH7 229 aa13.44□□□□□ -0.26
DNMT3A-202ENST00000321117 ST13P4Q8IZP2 240 aaPredicted RBP13.44□□□□□ -0.26
DNMT3A-202ENST00000321117 FEZF2Q8TBJ5 459 aa13.44□□□□□ -0.26
DNMT3A-202ENST00000321117 RAB3IL1Q8TBN0 382 aa13.44□□□□□ -0.26
DNMT3A-202ENST00000321117 JDP2Q8WYK2 163 aa13.44□□□□□ -0.26
DNMT3A-202ENST00000321117 ANKRD27Q96NW4 1050 aa13.44□□□□□ -0.26
DNMT3A-202ENST00000321117 LRRC19Q9H756 370 aa13.44□□□□□ -0.26
DNMT3A-202ENST00000321117 TOPORSQ9NS56 1045 aaPredicted RBP13.44□□□□□ -0.26
DNMT3A-202ENST00000321117 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.44□□□□□ -0.266e-7■■■■□ 22.9
DNMT3A-202ENST00000321117 BCAP29Q9UHQ4 241 aa13.44□□□□□ -0.26
DNMT3A-202ENST00000321117 STRIP2Q9ULQ0 834 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms