RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TRIM50Q86XT4 487 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 FAM71AQ8IYT1 594 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 ZNF564Q8TBZ8 553 aaPredicted RBP16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 GPRASP2Q96D09 838 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 SEMA4AQ9H3S1 761 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 ADAM22Q9P0K1 906 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 NOCTQ9UK39 431 aaKnown RBP16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 PYGMP11217 842 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 PMS2P54278 862 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 ADCY2Q08462 1091 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 GPD1LQ8N335 351 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 FBXO25Q8TCJ0 367 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 HELQQ8TDG4 1101 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 CORO1CQ9ULV4 474 aaPredicted RBP16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 ATAD5Q96QE3 1844 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 NCANO14594 1321 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 FOXO6A8MYZ6 492 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 RGS16O15492 202 aaPredicted RBP16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 DGAT1O75907 488 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 PGK2P07205 417 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 CFHP08603 1231 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 CCND1P24385 295 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 ANXA13P27216 316 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 BLMHQ13867 455 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 CATSPERGQ6ZRH7 1159 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 HOOK3Q86VS8 718 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 ASAP3Q8TDY4 903 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 ZNF516Q92618 1163 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 KLHL29Q96CT2 875 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 PGM2Q96G03 612 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 PPP1R16BQ96T49 567 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 SH3GL3Q99963 347 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 CCDC113Q9H0I3 377 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 PABPC3Q9H361 631 aaKnown RBP16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 TMEM8AQ9HCN3 771 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 FGFR1OP2Q9NVK5 253 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 PSME4Q14997 1843 aa16.55■□□□□ 0.24
SHROOM1-201ENST00000319854 MAP3K13O43283 966 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 GJB6O95452 261 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 CREB1P16220 341 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 ATP4AP20648 1035 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 OSTNP61366 133 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 STRN3Q13033 797 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 ZNF394Q53GI3 561 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 DUPD1Q68J44 220 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 DEPTORQ8TB45 409 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 MGARPQ8TDB4 240 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 PTPRJQ12913 1337 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 GOLGA6L10A0A0M3HER8 536 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 ANKRD33BA6NCL7 494 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 A6NHS1 94 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 TTLL13PA6NNM8 815 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 DDNO94850 711 aaPredicted RBP16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 NUDT17P0C025 328 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 SRGAP2CP0DJJ0 459 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 ZDHHC24Q6UX98 284 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 CCDC25Q86WR0 208 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 RHOT2Q8IXI1 618 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 OTUD5Q96G74 571 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 MLXIPLQ9NP71 852 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 ZNF302Q9NR11 478 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 FBXO40Q9UH90 709 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 FER1L6Q2WGJ9 1857 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 ADM5C9JUS6 153 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 K7ERI5 159 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 STBD1O95210 358 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 OAS1P00973 400 aaKnown RBP16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 PIK3CAP42336 1068 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 VGLL4Q14135 290 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 MYBPC2Q14324 1141 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 STXBP2Q15833 593 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 CNGA2Q16280 664 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 ABHD15Q6UXT9 468 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 UBL4BQ8N7F7 174 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 SHC3Q92529 594 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 C1orf112Q9NSG2 853 aa16.54■□□□□ 0.24
SHROOM1-201ENST00000319854 FZD9O00144 591 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 VPS41P49754 854 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 BNIP1Q12981 228 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 TTLL12Q14166 644 aaPredicted RBP16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 TRIP13Q15645 432 aaPredicted RBP16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 LY6KQ17RY6 165 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 ZFYVE27Q5T4F4 411 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 AP1ARQ63HQ0 302 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 ZDHHC14Q8IZN3 488 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 FITM2Q8N6M3 262 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 SLC17A8Q8NDX2 589 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 DNAJC17Q9NVM6 304 aaKnown RBP16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 NKX1-2Q9UD57 310 aaPredicted RBP16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 ANAPC7Q9UJX3 599 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 USTQ9Y2C2 406 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 KIAA1217Q5T5P2 1943 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 MSH2P43246 934 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 COPS2P61201 443 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 DENND2CQ68D51 928 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 C12orf56Q8IXR9 622 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 MCPH1Q8NEM0 835 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 C1orf54Q8WWF1 131 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 ERP44Q9BS26 406 aa16.53■□□□□ 0.24
SHROOM1-201ENST00000319854 HOXC10Q9NYD6 342 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms